Pairwise Alignments
Query, 481 a.a., minor curlin subunit CsgB, nucleation component of curlin monomers from Pseudomonas putida KT2440
Subject, 500 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B
Score = 120 bits (302), Expect = 8e-32
Identities = 135/501 (26%), Positives = 206/501 (41%), Gaps = 98/501 (19%)
Query: 40 SQTQASFASATQ-NQTGMGHNHLAVQAESTSDIQQSATGQYNAGYAEQLF-ENGSQITQH 97
+Q AS S Q NQ+G G++ Q TG N +QL EN + +TQ
Sbjct: 22 AQAFASDISEIQVNQSGYGNDTTVEQ-----------TGVLNLAQVDQLGDENTTTVTQD 70
Query: 98 AGGSYNDAFASQSLGSNNESLQ----------TQQGVGNKSTVWQDS--QEGSKATSG-- 143
G +N+AF N+ S++ +Q G N V Q + T+G
Sbjct: 71 --GVWNEAFVDSEGNQNSVSVEQAEDWHIAGVSQTGDNNTDNVVQTGFFNQSDAVTAGNG 128
Query: 144 ------QSGQRNEAFIEQTFGGSNNRSTVNQTGQDNYATAEHLNHVDGDIQVYQEGHDNW 197
Q+G +N + +E T G NN + V+Q G NYA + D D ++ Q G++N
Sbjct: 129 NAVDVMQAGDQNASNVELT--GDNNSAWVDQDGSSNYAVFRVQGN-DNDGEITQLGNNN- 184
Query: 198 AYGDQREGTGGTIAI---GQYGGGNSVEVWQDTQIGSQASVVQTGQSNEGYIDQSFGVSN 254
GG IA+ G N V ++Q+ G N G + G +N
Sbjct: 185 --------QGGLIALDFTANVGNNNDVSIYQE------------GDDNVGGVRGVAGDNN 224
Query: 255 KVSLSQQGNANASWSDQFETNNSTTTITQTGNNNLH-FTYQNGENLNLTINTQGNGNSIT 313
+V + Q GN N + + +N+ T+TQ G+ N+ + G+N ++ IN G+ N+I
Sbjct: 225 EVEIEQVGNNNVGFVYALQGSNNDLTMTQDGDRNVAVLEFTTGDNNDVEINQSGSENAIG 284
Query: 314 ASNWKGAKMGG------QFGTNQNATINQAGNGNGVNLTQKGADQLATLTQTGKGNQMST 367
S + Q G + +A G+ N V+L Q+G A G N ++
Sbjct: 285 DSLIAVIEGSDNMIDIEQEGFSNSAQFIVDGDDNDVDLEQEGDLNYAEFVAVGNDNTLNL 344
Query: 368 KQDDVSNELYFEQNGTDNILIADQRGTDNYAYGSSQGTGNTITLDQSGYSNQSYTNQLYG 427
+ N+L G DN L Q G NYAY + G N + + Q G N++ + G
Sbjct: 345 SSEGNGNQLLAGAFGEDNSLEVAQEGDVNYAYSVAFGNDNEVDIAQMGNDNEAIVT-IEG 403
Query: 428 SGNEATI-KQTDSINV-----------AYVTQG----------------GQSNKAFVDQS 459
+ N I Q+ +NV A +TQ G+ N V QS
Sbjct: 404 NNNTDIIGTQSGDLNVLDLLIQGDENLAQITQTGNGNWVGGDAGAFAVVGEGNSFIVAQS 463
Query: 460 GVAQSATITQLGSANLATVTQ 480
G T Q+GS+N+ VTQ
Sbjct: 464 GNDNLVTGAQMGSSNVINVTQ 484
Score = 95.5 bits (236), Expect = 4e-24
Identities = 115/406 (28%), Positives = 163/406 (40%), Gaps = 84/406 (20%)
Query: 35 NIAEVSQTQASFASATQN--QTGMGHNHLAVQAESTSDIQQSATGQYNAGYAEQLFENGS 92
+IA VSQT + T N QTG + AV A + + + G NA E +N S
Sbjct: 96 HIAGVSQTGDN---NTDNVVQTGFFNQSDAVTAGNGNAVDVMQAGDQNASNVELTGDNNS 152
Query: 93 QITQHAGGSYNDAFASQS---------LGSNNE----SLQTQQGVGNKS--TVWQDSQEG 137
G S F Q LG+NN+ +L VGN + +++Q+ +
Sbjct: 153 AWVDQDGSSNYAVFRVQGNDNDGEITQLGNNNQGGLIALDFTANVGNNNDVSIYQEGDDN 212
Query: 138 SKATSGQSGQRNEAFIEQT----------FGGSNNRSTVNQTGQDNYATAEHLNHVDGDI 187
G +G NE IEQ GSNN T+ Q G N A E + D+
Sbjct: 213 VGGVRGVAGDNNEVEIEQVGNNNVGFVYALQGSNNDLTMTQDGDRNVAVLEFTTGDNNDV 272
Query: 188 QVYQEGHDNWAYGDQR----EGTGGTIAIGQYGGGNSVEVWQD--------TQIG--SQA 233
++ Q G +N A GD EG+ I I Q G NS + D Q G + A
Sbjct: 273 EINQSGSEN-AIGDSLIAVIEGSDNMIDIEQEGFSNSAQFIVDGDDNDVDLEQEGDLNYA 331
Query: 234 SVVQTGQSN------EGYIDQ----SFGVSNKVSLSQQGNANASWSDQFETNNST----- 278
V G N EG +Q +FG N + ++Q+G+ N ++S F +N
Sbjct: 332 EFVAVGNDNTLNLSSEGNGNQLLAGAFGEDNSLEVAQEGDVNYAYSVAFGNDNEVDIAQM 391
Query: 279 -----TTITQTGNNNLHFTYQNGENLN-LTINTQGNGN--SITAS---NWKGAKMGG--- 324
+T GNNN +LN L + QG+ N IT + NW G G
Sbjct: 392 GNDNEAIVTIEGNNNTDIIGTQSGDLNVLDLLIQGDENLAQITQTGNGNWVGGDAGAFAV 451
Query: 325 ----------QFGTNQNATINQAGNGNGVNLTQKGADQLATLTQTG 360
Q G + T Q G+ N +N+TQ G + +AT+ Q G
Sbjct: 452 VGEGNSFIVAQSGNDNLVTGAQMGSSNVINVTQVGNENVATVIQNG 497
Score = 65.9 bits (159), Expect = 3e-15
Identities = 47/148 (31%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 334 INQAGNGNGVNLTQKGADQLATLTQTGKGNQMSTKQDDVSNELYFEQNGTDNILIADQRG 393
+NQ+G GN + Q G LA + Q G N + QD V NE + + G N + +Q
Sbjct: 34 VNQSGYGNDTTVEQTGVLNLAQVDQLGDENTTTVTQDGVWNEAFVDSEGNQNSVSVEQAE 93
Query: 394 TDNYAYGSSQGTGNTITLDQSGYSNQSYTNQLYGSGNEATIKQTDSINVAYVTQGGQSNK 453
+ A S G NT + Q+G+ NQS G+GN + Q N + V G +N
Sbjct: 94 DWHIAGVSQTGDNNTDNVVQTGFFNQSDAVTA-GNGNAVDVMQAGDQNASNVELTGDNNS 152
Query: 454 AFVDQSGVAQSATITQLGSANLATVTQQ 481
A+VDQ GS+N A Q
Sbjct: 153 AWVDQ-----------DGSSNYAVFRVQ 169