Pairwise Alignments

Query, 481 a.a., minor curlin subunit CsgB, nucleation component of curlin monomers from Pseudomonas putida KT2440

Subject, 502 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  128 bits (322), Expect = 4e-34
 Identities = 139/534 (26%), Positives = 214/534 (40%), Gaps = 94/534 (17%)

Query: 3   KLAPLSAAIVLALAGQAMAADSTSS----QTQDGKENIAEVSQTQASFASATQNQTGMGH 58
           K++ ++ AI   L+G A+AA + +     QT +G++ +  V+QT    A+A   QTG   
Sbjct: 6   KMSLIALAITAGLSGHALAASTINEISVKQTGEGQDTL--VAQTGVINAAAV-TQTGNAQ 62

Query: 59  NHLAVQAESTSDIQQSATGQYNAGYAEQLFENGSQITQHAGGSYNDAFASQSLGSNNESL 118
               VQ     + Q ++TG  N     Q      Q   H         A    G+NNE+ 
Sbjct: 63  VATVVQDGVWHEAQVNSTGDANEVTVSQ------QTDWHVA-------AVDVTGNNNEAE 109

Query: 119 QTQQGVGNKSTVWQDSQEGSKATS-GQSGQRNEAFIEQTFGGSNNRSTVNQTGQDNYATA 177
            TQ G  N+S+   D        S  Q G+ NE+++E T  G+ N + V Q G +N A  
Sbjct: 110 VTQDGFFNQSS--NDVVGNDNLVSVNQLGELNESYVEIT--GNENSAFVEQEGDENLAVF 165

Query: 178 E-HLNHVDGDIQVYQEGHDNWAYG-----DQREGTGGTIAIGQYGGGNSVEVWQDTQIGS 231
               ++ DGDI+ Y  G++N A           G    +++ Q G  N           +
Sbjct: 166 RVEGDNNDGDIKQY--GNNNQAGLIALDLSANVGNNNDVSVEQIGNNNFGAAKGIAGNDN 223

Query: 232 QASVVQTGQSNEGYIDQSFGVSNKVSLSQQGNANASWSDQFETNNSTTTITQTGNNNLHF 291
              + Q G ++ G++    G  N +S+ Q+G+ N ++      +++T  ITQ G++N   
Sbjct: 224 SVDIYQKGDNHTGFVYALAGSENDISMEQEGSNNTAYLSMTTGDDNTVDITQDGDSNTV- 282

Query: 292 TYQNGENLNLTINTQGNGNSITASNWKGAKMGGQFGTNQNATINQAGNGNGVNLTQKGAD 351
               G++L   I  QG+ N IT           Q G +  A     G+ N V+L Q+G  
Sbjct: 283 ----GDSLIADI--QGDDNDITIK---------QKGDSNGAEFQVWGDSNDVDLKQRGDA 327

Query: 352 QLATLTQTGKGNQMSTKQDDVSNELYFEQNGTDNILIADQRGTDNYAYGSSQGTGNTITL 411
             AT    G  N         +NEL     G DN +   Q G  N+AY  + G  N + +
Sbjct: 328 NFATFGAYGTDNDFDLSSKGDNNELVAFATGEDNSIEISQEGDANFAYVDATGNDNEVNV 387

Query: 412 DQSGYSNQSYTNQ-----------------------LYGSGNEATIKQTDS--------- 439
           +Q G  N++                           + G  N A I Q  S         
Sbjct: 388 EQDGDQNETIITVEGNNNADVTALQHRGDLNLIDLIIEGDENAAEITQAGSGNWVGGDSS 447

Query: 440 -------------INVAYVTQGGQSNKAFVDQSGVAQSATITQLGSANLATVTQ 480
                         N   +TQ G  N     Q+G   S ++TQ G  N+ATV Q
Sbjct: 448 SSFAASSFGVSGDNNSLMITQTGNDNLVLGSQAGNNNSISVTQSGDMNVATVVQ 501



 Score = 44.7 bits (104), Expect = 7e-09
 Identities = 24/55 (43%), Positives = 29/55 (52%)

Query: 427 GSGNEATIKQTDSINVAYVTQGGQSNKAFVDQSGVAQSATITQLGSANLATVTQQ 481
           G G +  + QT  IN A VTQ G +  A V Q GV   A +   G AN  TV+QQ
Sbjct: 37  GEGQDTLVAQTGVINAAAVTQTGNAQVATVVQDGVWHEAQVNSTGDANEVTVSQQ 91