Pairwise Alignments

Query, 157 a.a., putative Curli fiber surface-exposed nucleator CsgB from Pseudomonas putida KT2440

Subject, 139 a.a., minor curlin subunit CsgB, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 81.3 bits (199), Expect = 6e-21
 Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 1/105 (0%)

Query: 52  AVIEQQGLGNRAALDQNGQALLGRIVQSGGAQEAYILQEGSDLMAIISQQGNGNSASIRQ 111
           A+IE+ G  N   L Q G A  G + QSG    AY+ Q G+D +++++Q G  N   + Q
Sbjct: 36  ALIERSGRDNLIDLVQQGTANQGIVFQSGSDNSAYVTQAGNDNISLVTQIGTNNEVQLLQ 95

Query: 112 SGSSNNAAIEQIGNDNSASIVQSGSGLNSSVTQAGNGQHVQITQY 156
            G+ N A+I QIGNDN   + Q GSG N S+ Q  +G  + ITQY
Sbjct: 96  VGAQNKASITQIGNDNLVQLNQLGSG-NFSIQQIADGAAISITQY 139



 Score = 50.1 bits (118), Expect = 1e-11
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 11/83 (13%)

Query: 84  EAYILQEGSDLMAIISQQGNGNSASIRQSGSSNNAAIEQIGND-----------NSASIV 132
           +A I + G D +  + QQG  N   + QSGS N+A + Q GND           N   ++
Sbjct: 35  QALIERSGRDNLIDLVQQGTANQGIVFQSGSDNSAYVTQAGNDNISLVTQIGTNNEVQLL 94

Query: 133 QSGSGLNSSVTQAGNGQHVQITQ 155
           Q G+   +S+TQ GN   VQ+ Q
Sbjct: 95  QVGAQNKASITQIGNDNLVQLNQ 117



 Score = 50.1 bits (118), Expect = 1e-11
 Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 36  GEPVIIRLLPAGAGQAAVIEQQGLGNRAALDQNGQALLGRIVQSGGAQEAYILQEGSDLM 95
           G   +I L+  G     ++ Q G  N A + Q G   +  + Q G   E  +LQ G+   
Sbjct: 42  GRDNLIDLVQQGTANQGIVFQSGSDNSAYVTQAGNDNISLVTQIGTNNEVQLLQVGAQNK 101

Query: 96  AIISQQGNGNSASIRQSGSSNNAAIEQIGNDNSASIVQ 133
           A I+Q GN N   + Q G S N +I+QI +  + SI Q
Sbjct: 102 ASITQIGNDNLVQLNQLG-SGNFSIQQIADGAAISITQ 138



 Score = 48.1 bits (113), Expect = 6e-11
 Identities = 24/62 (38%), Positives = 35/62 (56%)

Query: 94  LMAIISQQGNGNSASIRQSGSSNNAAIEQIGNDNSASIVQSGSGLNSSVTQAGNGQHVQI 153
           L A+I + G  N   + Q G++N   + Q G+DNSA + Q+G+   S VTQ G    VQ+
Sbjct: 34  LQALIERSGRDNLIDLVQQGTANQGIVFQSGSDNSAYVTQAGNDNISLVTQIGTNNEVQL 93

Query: 154 TQ 155
            Q
Sbjct: 94  LQ 95



 Score = 30.4 bits (67), Expect = 1e-05
 Identities = 17/62 (27%), Positives = 30/62 (48%)

Query: 94  LMAIISQQGNGNSASIRQSGSSNNAAIEQIGNDNSASIVQSGSGLNSSVTQAGNGQHVQI 153
           L+ + S     ++A + +   +  A IE+ G DN   +VQ G+     V Q+G+     +
Sbjct: 12  LLLLCSYLTPTHAADVSELPITLQALIERSGRDNLIDLVQQGTANQGIVFQSGSDNSAYV 71

Query: 154 TQ 155
           TQ
Sbjct: 72  TQ 73