Pairwise Alignments

Query, 309 a.a., putative 3-hydroxy-3-methylglutaryl-CoA lyase from Pseudomonas putida KT2440

Subject, 520 a.a., 2-isopropylmalate synthase (EC 2.3.3.13) from Xanthomonas campestris pv. campestris strain 8004

 Score = 65.1 bits (157), Expect = 3e-15
 Identities = 79/296 (26%), Positives = 132/296 (44%), Gaps = 29/296 (9%)

Query: 4   ITINEVGLRDGLQSLQVIMPTAAKRRWIDAAYGAGVRHMEVASFVPARLLPQMADAREVV 63
           I I +  LRDG QS    M    K     A    GV  +E     PA       +A  ++
Sbjct: 12  IRIFDTTLRDGEQSPGCSMTPQQKLVMARALDALGVDIIETG--FPASSYSDR-EAVAMM 68

Query: 64  AHALTYPDLQVT--VLAPNLRGARDALESGAH-RIVAPVSVSTAHSLANVRRTPVEMVEE 120
              L  P L V    L  ++  +  ALE+ A+ R+   +S S  H    +R +  +++E 
Sbjct: 69  GRELRRPTLAVLSRCLQADIEISARALEAAANPRLHVFLSTSPLHREHKLRMSREQVLES 128

Query: 121 LGRMCQLRTEMGLHGVQVVAGMSVAFGCTRQGEVPLADLCALTRQVIEAGCDLVSLGDTT 180
           + +   L     +  ++  A        TR  E  LA++   TR  I AG   ++L DT 
Sbjct: 129 VHKHVTLARGY-IDDIEFSAE-----DATRTEEDFLAEV---TRVAIAAGATTINLPDTV 179

Query: 181 GYANPGQV-AMVLQAVREIAGDR--LKAAHFHDTRGLALANSLVAVQQGIGELDASLAGL 237
           G+  P ++  M  + +  + G    + + H H+  GLA ANSL A++ G  +++ ++ G+
Sbjct: 180 GFTTPEEIRGMFSRLIASVEGAEKVIFSTHCHNDLGLAAANSLAAIEGGARQVECTINGI 239

Query: 238 GGCPFAPGASGNTVTEDLVFMLQSMG----YDTGIDLPALIETRQVLSEALPGEPL 289
           G        +GN   E++   L+  G     DT I+ P ++ T Q+L + L G P+
Sbjct: 240 G------ERAGNCALEEITMALKVRGAFYNLDTAINTPRIVSTSQLL-QRLVGMPV 288