Pairwise Alignments

Query, 309 a.a., putative 3-hydroxy-3-methylglutaryl-CoA lyase from Pseudomonas putida KT2440

Subject, 599 a.a., oxaloacetate decarboxylase (RefSeq) from Shewanella amazonensis SB2B

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 69/291 (23%), Positives = 117/291 (40%), Gaps = 48/291 (16%)

Query: 4   ITINEVGLRDGLQSL-------QVIMPTAAK---------RRWIDAAYGAGVRHMEVASF 47
           + + +V LRD  QSL       + ++P AAK           W  A + A +R++    +
Sbjct: 5   LALTDVVLRDAHQSLLATRLRIEDMLPIAAKLDQVGYWSLETWGGATFDACIRYLGEDPW 64

Query: 48  VPARLLPQMADAREVVAHALTYPDLQVTVLAPNLRGARDALESGAHRIVAPVSVSTAHSL 107
              RLL Q          A+    +Q+ +   NL G R   +   HR V       AH  
Sbjct: 65  ERLRLLKQ----------AMPNTPMQMLLRGQNLLGYRHYADDLVHRFV-----ERAHDN 109

Query: 108 A-NVRRTPVEM--VEELGRMCQLRTEMGLHGVQVVAGMSVAFGCTRQGEVPLADLCALTR 164
             +V R    M  V  L    +   ++G H    ++        T      L     + +
Sbjct: 110 GMDVFRVFDAMNDVRNLQEAVRAVKQVGAHAQGTIS-------YTTSPVHNLDTWVDMAK 162

Query: 165 QVIEAGCDLVSLGDTTGYANPGQVAMVLQAVREIAGDRLKAAHFHDTRGLALANSLVAVQ 224
           ++ + GCD + + D  G   P +   ++  ++   G  + A H H T GL+ A    A++
Sbjct: 163 RLEDLGCDSLCIKDMAGLLRPMEAFELVSRLKSQTG-LMVAMHSHATTGLSTATYQKAIE 221

Query: 225 QGIGELDASLAGLGGCPFAPGASGNTVTEDLVFMLQSMGYDTGIDLPALIE 275
            GI  LD +++ +          G++ TE LV M++     TG+D+  L E
Sbjct: 222 AGIDVLDTAISSMS------QTYGHSATETLVAMVEDTERSTGLDMALLEE 266