Pairwise Alignments

Query, 293 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 302 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  115 bits (289), Expect = 9e-31
 Identities = 86/287 (29%), Positives = 139/287 (48%), Gaps = 12/287 (4%)

Query: 3   LKALRCCVEIVRQGSFTKAAQHLHIAQPALSMAVTRLEEELGVTLFNRTTRKVILTAEGE 62
           +K L C V +   GSFT+AA+ LH+ QP LS  + RLE+     L  R  +K+ LT  GE
Sbjct: 5   IKNLHCFVTLAETGSFTRAAEKLHLTQPTLSKMLQRLEDHWQQQLIIRNNQKLSLTQAGE 64

Query: 63  QFLPRIASALREMDVARQELRDMADLKRGEVRLGIPPMFGLHYVPGLMNAFRKSYPGIAM 122
             L      L +  +  ++L ++  ++RG +RLG+ PM     V  L+ AFR  YPG+ +
Sbjct: 65  LLLEHAREMLGQWHLLEEDLSNLRGVQRGYLRLGVCPMMS-SLVIELLTAFRARYPGVRL 123

Query: 123 TVFEGSAEDIGHRLEQREIDLALLESRRVPPDKESIL-LGSDEMLACMHPDHPYAGKAYL 181
            +FE         L    +D+A         D+ +   L +  +LAC+   H  A KA L
Sbjct: 124 EMFEYGGFGCEKALLANNLDIAFTALPATHADELTAQPLTAYPLLACLPAGHKLANKAAL 183

Query: 182 TAEDLRNTDMVVFDRTFVQRHLLDAFFAEHGITYQVALQS---NFVSLVVQAALDNMGVA 238
              D  +   +++++ F    LLD+     G+   VA +S   +F++ +V+A   NMG+A
Sbjct: 184 DWCDFGSHPFIMYNQDFALAKLLDSLARNAGVELNVAYRSGQWDFLASMVEA---NMGLA 240

Query: 239 TLLRSVQQRTPGIVGVPFRP---AQQMSFRLCWRSGEYLSLASKRFI 282
            L   + ++      + FRP          L WRS  +L+ A+  F+
Sbjct: 241 ILPAPICEKLTD-KALCFRPLSGGHTWDLALIWRSHLHLTPAAAAFL 286