Pairwise Alignments

Query, 627 a.a., p-coumarate CoA-ligase (EC 6.2.1.12) (from data) from Pseudomonas putida KT2440

Subject, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 69.7 bits (169), Expect = 3e-16
 Identities = 88/413 (21%), Positives = 170/413 (41%), Gaps = 67/413 (16%)

Query: 52  LLERLVHWAQVRPDTTFIAARQADGAWRSISYVQMLADVRTIAANLLGLGLSAERPLALL 111
           ++ER+ + ++ RPD   IA  + D   R+ISY  + +D++  AA L+ LG+++E  + + 
Sbjct: 3   VVERIFNHSESRPDC--IAVYEND---RTISYENLASDIKKTAAKLVSLGVTSEDAVLVR 57

Query: 112 SGNDIEHLQIALGAMYAGIAYCPVSPAYALLSQDFAKLRHVCEVLTPGVVFVSDSQPFQR 171
           S N    + +     Y G  +  V+P       D + +  + + + P + F+  SQ F R
Sbjct: 58  SNNSYSFILLYFSIHYVGAKFVNVAP-----DSDVSYVSFIEDKVNPKL-FIEKSQDFIR 111

Query: 172 AFEAVLDDSVGVISVRGQVAGRPHISFDSLLQPGDLAAADAAFAATGPDTIAKFLFTSGS 231
             ++   D++     RG                                 IA  +FTSG+
Sbjct: 112 NIDSYTFDNIFPPQARG---------------------------------IADIMFTSGT 138

Query: 232 TKLPKAVITTQRMLCANQQMLLQTFPTFAEEPPVLVDWLPWNHTFGGSHNLGIVLYNGGS 291
           T  PK V+ + + L    + ++       E+  +L+  +P +H+F  +  +   L+ GG+
Sbjct: 139 TGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELLL--MPLSHSFAMA-RMRTSLFAGGA 195

Query: 292 FYLDAGKPTPQGFAETLRNLREISPTAYLTVPKGWEELVKALEQDPALREVFFARIKLFF 351
             +     + +      + +     T    VP  W  +    +    L   +  ++    
Sbjct: 196 IVVGC---SFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKD---LIRKYSEQLNFIE 249

Query: 352 FAAAGLSQSVWDRLDRIAEQHCGERIRMMAGLGMTEASPSCTFTTGPLSMAGYVGLPAPG 411
           F +A      ++   ++AE      + M  GL  TE S   TF          VG    G
Sbjct: 250 FGSAHFP---FEDKKQVAEWFPNTNVVMHYGL--TEVS-RATFIDFHNDDINAVGHRYRG 303

Query: 412 CEVKLVP-------VGDKLEARFRGPHIMPGYWRSPQQTAEAFDEEGFYCSGD 457
            + K++         G++ E  F+ P ++ GY+ + Q T++ F  EG++ +GD
Sbjct: 304 ADFKIIDNKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCF-VEGYFKTGD 355