Pairwise Alignments

Query, 627 a.a., p-coumarate CoA-ligase (EC 6.2.1.12) (from data) from Pseudomonas putida KT2440

Subject, 649 a.a., long-chain-fatty-acid CoA ligase from Synechococcus elongatus PCC 7942

 Score = 97.8 bits (242), Expect = 1e-24
 Identities = 145/621 (23%), Positives = 244/621 (39%), Gaps = 121/621 (19%)

Query: 80  SISYVQMLADVRTIAANLLGLGLSAERP------LALLSGNDIEHLQIALGAMYAGIAYC 133
           ++SY ++   ++  AA LL LG+           LA  + N    L    G + AG A  
Sbjct: 59  TLSYQELAIQIQAFAAGLLALGVPTSTADDFPPRLAQFADNSPRWLIADQGTLLAGAANA 118

Query: 134 PVSPAYALLSQDFAKLRHVCEVLTPGVVFVSDSQPFQRAFEAVLDDSVGVISVRGQVAGR 193
            V  A A +S+    L +V E      + V D+   ++    +   S+  + V       
Sbjct: 119 -VRGAQAEVSE----LLYVLEDSGSIGLIVEDAALLKKLQPGLASLSLQFVIVLSDEV-- 171

Query: 194 PHISFDSLLQPG--DLAAADAAFAATGP----DTIAKFLFTSGSTKLPKAVITTQRMLCA 247
             +  DSL   G  D+     +  A  P    D +A  ++TSG+T  PK V+ +      
Sbjct: 172 --VEIDSLRVVGFSDVLEMGRSLPAPEPILQLDRLATLIYTSGTTGPPKGVMLSH----G 225

Query: 248 NQQMLLQTFPTFAEEPP--VLVDWLPWNHTFGGSHNLGIVLYNGGSFYLDAGKPTPQGFA 305
           N    + T     +  P   ++  LP  H+           Y     Y    +   Q + 
Sbjct: 226 NLLHQVTTLGVVVQPQPGDTVLSILPTWHS-----------YERACEYFLLSQGCTQVYT 274

Query: 306 ETLRN----LREISPTAYLTVPKGWEELVKALE----QDPA----LREVFFARIKLFFFA 353
            TLRN    +R+  P   ++V + WE + + ++    + PA    L + FF   + +  A
Sbjct: 275 -TLRNVKQDIRQYRPQFMVSVLRLWESIYEGVQKQFREQPAKKRRLIDTFFGLSQRYVLA 333

Query: 354 AA--------GLSQSVWDRL----------------DRIA----EQHCGERIR------- 378
                      L+QS   RL                DR+      +  G RIR       
Sbjct: 334 RRRWQGLDLLALNQSPAQRLAEGVRMLALAPLHKLGDRLVYGKVREATGGRIRQVISGGG 393

Query: 379 ----------------MMAGLGMTEASPSCTFTTGPLSMAGYVGLPAPGCEVKLV----- 417
                           ++ G G+TE SP  T      ++ G  G P PG  +++V     
Sbjct: 394 SLALHLDTFFEIVGVDLLVGYGLTETSPVLTGRRPWHNLRGSAGQPIPGTAIRIVDPETK 453

Query: 418 ---PVGDKLEARFRGPHIMPGYWRSPQQTAEAFDEEGFYCSGDALKLADARQPELGLMFD 474
              P GD+     +GP IM GY+  P+ TA+A D EG++ +GD   +      E  L+  
Sbjct: 454 ENRPSGDRGLVLAKGPQIMQGYFNKPEATAKAIDAEGWFDTGDLGYIVG----EGNLVLT 509

Query: 475 GRIAEDFKLSSGVFVSVGPLRNRAVLEGSPYVQDIVVTAPDRECLGLLVFPRLPECRRLA 534
           GR  +   L++G  +   P+ +  +   S Y+  I++   DR+ LG L+   +P    +A
Sbjct: 510 GRAKDTIVLTNGENIEPQPIEDACL--RSSYISQIMLVGQDRKSLGALI---VPNQEAIA 564

Query: 535 GLAEDASDARVLANDTVRSWFADWLERLNRDAQGNA--SRIEWLSLLAEPPSIDAGEITD 592
             A +   ++      V+    + L R  RD  G     RI    L+ EP S++ G++T 
Sbjct: 565 LWASEQGISQTDLQGVVQKLIREELNREVRDRPGYRIDDRIGPFRLIEEPFSMENGQLTQ 624

Query: 593 KGSINQRAVLQRRAAQVEALY 613
              I +  V +  AA ++ ++
Sbjct: 625 TLKIRRNVVAEHYAAMIDGMF 645