Pairwise Alignments

Query, 381 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 376 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  115 bits (288), Expect = 2e-30
 Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 22/261 (8%)

Query: 120 LIMLFAVGMSVSAVSCYSSYRNMTLVSMGLV------LLPSTGWLLLQPSTLQQGIALAV 173
           L+++FAV +       Y++   ++ V +  +       + ST +LL      Q  + L  
Sbjct: 114 LVLMFAVFLQPKVFIRYAALAFLSFVGLAALDYYLQRAVDSTVFLL------QASVLLVT 167

Query: 174 LV----FAWFVVSATQSLSSALTTAWRLKHEMQRAHRLAMVASCTDELTGLNNRRAFFDN 229
           L+    FA  V    Q +          +  ++   R     + TDELTGL NRR F   
Sbjct: 168 LIWMCLFAGHVYRLRQRMRQRRFALQAHQDTLRGMMRQLEDLASTDELTGLYNRRRFLRI 227

Query: 230 ASAQHVRCRDAGTFMAVLMLDVDHFKQINDTFGHAAGDQVLQRIGAAISASLRDNDIAGR 289
           A  +  R R    F  + ++D+DHFK++ND  GHAAGD+VLQ   +   + LRD D+  R
Sbjct: 228 AEGELSRLRKGHQF-GLALIDLDHFKRVNDIHGHAAGDRVLQTFASVARSCLRDADVLAR 286

Query: 290 LGGEEFAILLPNTPPDTAIEVAERLRALIAKLRVND----EHPVTASIGLAFAKAPATEL 345
            GGEEF +LLP+T  +      ERLR   +K    +       ++ SIGL    A   +L
Sbjct: 287 YGGEEFVLLLPDTDAEQFSACCERLREAFSKAEPEEVDIAAGHLSLSIGLTLVNA-GDDL 345

Query: 346 GALLSSADSAMYLSKVSGRNR 366
            A L  AD A+Y +K +GRNR
Sbjct: 346 DAALQRADEALYRAKRAGRNR 366