Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 539 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  143 bits (360), Expect = 8e-39
 Identities = 91/260 (35%), Positives = 139/260 (53%), Gaps = 13/260 (5%)

Query: 1   MSPS-VLEIRGLRIE--TQAGVL--VHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLL 55
           MSP+ +L++R L +   T  GV+  V +V   +R GE   +VG SGSGKS+S   L+ LL
Sbjct: 1   MSPNPLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLL 60

Query: 56  PPGLA-RTQGQLLLDGQPLAASS------VRGRLTSLVLQNPRSAFNPVRNMASHAIETL 108
           P       +  ++ +G+ L   +      +RG    ++ Q P ++ NP   +     E +
Sbjct: 61  PKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAI 120

Query: 109 R-QRGITSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLL 167
           R  R ++   A+ R+      V L D +   Q F  + SGG LQR+MIA+AL+ E   L+
Sbjct: 121 RCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILI 180

Query: 168 ADEPTSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQ 227
           ADEPT+ LD   QA  L L+ E+    G+ +L +THD+GVV   AD+V VM  G +VE  
Sbjct: 181 ADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQG 240

Query: 228 PAHELFQRPASATARTLLHA 247
              +LF +P     R L+++
Sbjct: 241 STEQLFLQPEHDYTRMLINS 260



 Score =  112 bits (281), Expect = 1e-29
 Identities = 77/234 (32%), Positives = 116/234 (49%), Gaps = 14/234 (5%)

Query: 21  VHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLARTQGQLLLDGQPLAASSVRG 80
           V  + L+L++GE   +VG SGSGKS     L+ LLP     + GQ+   GQ   A S + 
Sbjct: 303 VKGISLELKQGETLGIVGESGSGKSTLGRALIGLLP-----STGQIAFKGQDFRALSEKQ 357

Query: 81  RLT-----SLVLQNPRSAFNPVRNMASHAIETL--RQRGITSAVARARMAHCLDAVGLAD 133
           RL       +V Q+P  + +P   +     E L   Q  I+      R    L+ V L  
Sbjct: 358 RLALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDP 417

Query: 134 TERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTSDLDALSQARFLDLLMELVQV 193
               +  +  + SGG  QR+ IA AL+ E  F+L DEPTS LD   Q   ++LL E+ + 
Sbjct: 418 NS--INRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKR 475

Query: 194 HGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELFQRPASATARTLLHA 247
             +G L ++HD+ VV   +D+V VM+ G+++E   A  +F  P     + L+ A
Sbjct: 476 RNIGYLFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAA 529