Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  147 bits (372), Expect = 4e-40
 Identities = 93/255 (36%), Positives = 140/255 (54%), Gaps = 11/255 (4%)

Query: 4   SVLEIRGLRIETQAGVLVH----DVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGL 59
           S+LE++ LRIE  +   VH     + L ++RGE+  +VG SG+GKS     ++DLL P  
Sbjct: 2   SLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPG 61

Query: 60  ARTQGQLLLDGQ------PLAASSVRGRLTSLVLQNPRSAFNPVRNMASHAIETLRQRGI 113
               G++ L+G+      P A   VRG     + Q+P ++ NP+  +     ET+     
Sbjct: 62  TIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQ 121

Query: 114 TSAV-ARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPT 172
            SA  A  R    +  VG+   E  L+ +  Q SGGM QR++IA+AL  E   ++ADEPT
Sbjct: 122 VSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPT 181

Query: 173 SDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHEL 232
           + LD   Q + L+L+ EL + + +G +LVTHDMGVV+   D+VAVM  G +VE  P  ++
Sbjct: 182 TALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKV 241

Query: 233 FQRPASATARTLLHA 247
              P     R+L+ A
Sbjct: 242 LGTPEHPYTRSLISA 256



 Score =  101 bits (251), Expect = 4e-26
 Identities = 72/232 (31%), Positives = 110/232 (47%), Gaps = 14/232 (6%)

Query: 22  HDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLARTQGQLLLDGQPLAASSVRG- 80
           ++V   +  GE   LVG SGSGKS     +  L  P      G++  +G  L A      
Sbjct: 330 NNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNA----GRVTFEGIDLTALKSEHE 385

Query: 81  -----RLTSLVLQNPRSAFNPVRNMASHAIETLRQRGITSAVARARMA--HCLDAVGLAD 133
                R   +V QNP ++ NP   +     E +R   +T + +  R      L+ VGL  
Sbjct: 386 RRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQIVNDLLEHVGLGK 445

Query: 134 TERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTSDLDALSQARFLDLLMELVQV 193
              +   +  + SGG  QR+ IA AL      L+ DEPTS LD   QA+ L+LL +L   
Sbjct: 446 MAGL--KYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDLQDE 503

Query: 194 HGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELFQRPASATARTLL 245
             L +L ++HD+ V+ +  D+V VM+ G ++E  P  +LF  P    ++ L+
Sbjct: 504 LNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYSKKLI 555