Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 593 a.a., peptide transport ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  168 bits (425), Expect = 3e-46
 Identities = 102/260 (39%), Positives = 146/260 (56%), Gaps = 13/260 (5%)

Query: 1   MSPSVLEIRGLRIE----TQAGVLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLP 56
           M+ S+L ++ L ++    T   V+V  +   L  G    L G SGSGKS++ L L+ LLP
Sbjct: 1   MTSSLLSVKDLTVQVATPTGPKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQLLP 60

Query: 57  PGLARTQG-QLLLDGQPLAA------SSVRGRLTSLVLQNPRSAFNPVRNMASHAIETLR 109
             +AR  G    LDG+ + A        +RGR   ++ Q P ++ NPV  + +  I  + 
Sbjct: 61  KPMARIAGGSATLDGEDILALPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQLIGAIT 120

Query: 110 QRGITSA--VARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLL 167
             G TS    ARAR A  LD V + + ER L  +  +LSGG+ QR++IA+AL      L+
Sbjct: 121 AHGNTSGRRAARARAAELLDQVQIPEPERRLGQYPHELSGGLRQRIVIAMALAQNPKILI 180

Query: 168 ADEPTSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQ 227
           ADEPT+ LD   QA+ L L+ +L   HG+ V+++THDMGVVA  AD+V VM+ GR VE  
Sbjct: 181 ADEPTTALDVTVQAQILALIRKLQADHGISVIMITHDMGVVAEMADEVLVMKHGRTVEHA 240

Query: 228 PAHELFQRPASATARTLLHA 247
            + +LF  P  A  + LL A
Sbjct: 241 TSRDLFAHPQDAYTKELLSA 260



 Score =  111 bits (278), Expect = 3e-29
 Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 22/252 (8%)

Query: 11  LRIETQAGVL---------VHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLAR 61
           +R + + G+L         V  + L +RRGE  +LVG SG GKS +   LL+L+P     
Sbjct: 301 VRFDIKGGILQRPVRRLHAVEGISLSVRRGETLSLVGESGCGKSTTGKALLNLVP----- 355

Query: 62  TQGQLLLDGQP---LAASSVRGRL--TSLVLQNPRSAFNPVRNMASHAIETLRQRGITS- 115
             G + +DG+    L  S++R  L    ++ Q+P ++ +P   +     E L   G+ S 
Sbjct: 356 WTGDIRVDGRSTRGLRGSTMRPILRDVQMIFQDPYASLDPRMRVGDLVAEPLVIHGLASG 415

Query: 116 AVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTSDL 175
           +  R R+ +    VGL+  +  ++ +  + SGG  QR+ IA AL      ++ADE  + L
Sbjct: 416 SELRDRVEYLFKRVGLSPEQ--MKRYPHEFSGGQRQRICIARALSLSPKLIVADESVAAL 473

Query: 176 DALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELFQR 235
           D   QA+ LDLL ++    G+  L ++HDM VV + + +VAVM  GR VE     ++F+ 
Sbjct: 474 DVSIQAQVLDLLQDIQDETGVSYLFISHDMAVVEQISHRVAVMYMGRFVEMGTRRQIFES 533

Query: 236 PASATARTLLHA 247
           P     + L+ A
Sbjct: 534 PQHPYTKKLMAA 545