Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 625 a.a., peptide transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  142 bits (359), Expect = 1e-38
 Identities = 85/235 (36%), Positives = 127/235 (54%), Gaps = 7/235 (2%)

Query: 20  LVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLARTQGQLLLDGQPLAASS-- 77
           +V  V   +   E   +VG SGSGKS++ L ++ L  P   + +G + L G+ L + S  
Sbjct: 46  VVQGVSFDIGARETVAVVGESGSGKSVTALSIMRLNSPRGTKIEGSVKLGGKELLSLSDA 105

Query: 78  ----VRGRLTSLVLQNPRSAFNPVRNMASHAIETL-RQRGITSAVARARMAHCLDAVGLA 132
               +RG   +++ Q P ++ NPV  +     E+L   RG++ A A       L+ V + 
Sbjct: 106 EMRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAESLILHRGLSRAQAENETIRLLEKVRIP 165

Query: 133 DTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTSDLDALSQARFLDLLMELVQ 192
             +     +  + SGGM QR+MIA+AL  +   L+ADEPT+ LD   QA+ L+L+ EL Q
Sbjct: 166 AAKSRFHEYPHRFSGGMRQRVMIAMALACKPKLLIADEPTTALDVTIQAQILELIKELQQ 225

Query: 193 VHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELFQRPASATARTLLHA 247
             G+ VL +THDMGVVA  AD+  VM  G+ VE     ++F RP     R+LL A
Sbjct: 226 EDGMSVLFITHDMGVVAEIADRTVVMYKGQAVETASTDDIFNRPNHPYTRSLLSA 280



 Score =  113 bits (283), Expect = 8e-30
 Identities = 88/261 (33%), Positives = 135/261 (51%), Gaps = 25/261 (9%)

Query: 5   VLEIRGL--RIETQAGVL---------VHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLD 53
           VLE+ GL  R E ++G+          V +V   ++ GE   LVG SG GKS +   ++ 
Sbjct: 323 VLEVAGLTKRFEVKSGLFSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTGRSVMR 382

Query: 54  LLPPGLARTQGQLLLDGQP---LAASSVRGRLT--SLVLQNPRSAFNPVRNMASHAIETL 108
           L+ P    + G +LLDG     L+ + +R +     ++ Q+P ++ NP  N+ +   E L
Sbjct: 383 LVEP----SGGLVLLDGVDVLKLSQNELRHQRNHMQMIFQDPYASLNPRMNIGTAIAEPL 438

Query: 109 --RQRGITSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFL 166
               +G  S VA  ++A  L  VGL+    + + F  + SGG  QR+ IA AL  E   +
Sbjct: 439 LINGKGGQSEVAD-KVAELLQKVGLSPD--MAKRFPHEFSGGQRQRICIARALALEPKLI 495

Query: 167 LADEPTSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVEC 226
           +ADE  S LD   +++ ++L+++L    GL  L ++HDM VV R + +VAVM  G IVE 
Sbjct: 496 VADEAVSALDVSVKSQVVNLMLDLQARMGLAYLFISHDMAVVERVSHRVAVMYLGEIVEA 555

Query: 227 QPAHELFQRPASATARTLLHA 247
                +FQ P     R LL A
Sbjct: 556 GSREAIFQNPQHPYTRRLLSA 576