Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 533 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  167 bits (424), Expect = 3e-46
 Identities = 100/257 (38%), Positives = 150/257 (58%), Gaps = 10/257 (3%)

Query: 1   MSPSVLEIRGLRIE--TQAGVL--VHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLP 56
           M  S+L +RGL+++  T  G +  V  +DL +R GE   +VG SGSGKS + +G++ LL 
Sbjct: 4   MKDSILAVRGLKVDFYTPDGTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLLA 63

Query: 57  P-----GLARTQGQLLLDGQPLAASSVRGRLTSLVLQNPRSAFNPVRNMASHAIETL-RQ 110
                 G AR +GQ L+   P A + VRG   +++ Q P ++ +P+  +     E +   
Sbjct: 64  KNGTVTGSARYRGQELVGLAPKALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIVHH 123

Query: 111 RGITSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADE 170
           RG +   AR R+   L+ VG+ +  R + S+  +LSGG  QR+MIA+AL  E   L+ADE
Sbjct: 124 RGGSFKEARRRVLELLELVGIPEPGRRIDSYPHELSGGQRQRVMIAMALANEPDILIADE 183

Query: 171 PTSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAH 230
           PT+ LD   QA+ LDLL  L +  G+ ++L+THD+G+V   AD+VAVM  G +VE     
Sbjct: 184 PTTALDVTIQAQILDLLKSLQRRFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQGMTA 243

Query: 231 ELFQRPASATARTLLHA 247
           ++F+RP     R LL A
Sbjct: 244 DIFERPKGDYTRMLLEA 260



 Score =  112 bits (281), Expect = 1e-29
 Identities = 78/229 (34%), Positives = 113/229 (49%), Gaps = 4/229 (1%)

Query: 21  VHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLARTQGQLLLDGQPLAASSVRG 80
           V  V+L+LR+G+   +VG SGSGKS     LL LLP       G   + G    A     
Sbjct: 303 VDGVNLRLRQGQTIGIVGESGSGKSTLGRALLRLLPSSGYYRFGSTDISGFDRGAMRPLR 362

Query: 81  RLTSLVLQNPRSAFNPVRNMASHAIETLR--QRGITSAVARARMAHCLDAVGLADTERVL 138
           R   LV Q+P  + +P R +     E L   +  ++ A    R    L  VGL    R  
Sbjct: 363 RQLQLVFQDPYGSLSPRRTVGEIITEGLHVHEPDLSRADRDRRAIAALKEVGLDPASR-- 420

Query: 139 QSFAFQLSGGMLQRMMIALALMAETPFLLADEPTSDLDALSQARFLDLLMELVQVHGLGV 198
             +  + SGG  QR+ IA A++ +   ++ DEPTS LD   Q + ++LL +L + HGL  
Sbjct: 421 NRYPHEFSGGQRQRIAIARAIILKPKVVILDEPTSALDRSVQGQVIELLRDLQEKHGLSY 480

Query: 199 LLVTHDMGVVARCADQVAVMEAGRIVECQPAHELFQRPASATARTLLHA 247
           + ++HD+ VV   +D V VM+ GRIVE      +F  P     +TL+ A
Sbjct: 481 IFISHDLSVVKAMSDYVIVMKNGRIVEEGETDAIFDAPREPYTKTLIGA 529