Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 548 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  165 bits (418), Expect = 2e-45
 Identities = 101/275 (36%), Positives = 153/275 (55%), Gaps = 20/275 (7%)

Query: 1   MSPSVLEIRGLRIE--TQAGVL--VHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLL- 55
           M+  +LE+R L +E  T AGV+  V  +   L +GE   ++G SGSGKS+S   +++L+ 
Sbjct: 1   MAEHLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLID 60

Query: 56  -PPGLARTQGQLLLDGQPLAAS------SVRGRLTSLVLQNPRSAFNPVRNMASHAIETL 108
            PPG   + G++LLDG+ L          V GR  +++ Q+P S  NPV ++     E +
Sbjct: 61  MPPGRI-SSGEILLDGRDLLTMPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAM 119

Query: 109 RQRGITSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLA 168
              G+  + AR      L  VG+ + ER ++ +  + SGG  QR+MIA+AL      L+A
Sbjct: 120 TTHGLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQRQRVMIAMALALRPDLLIA 179

Query: 169 DEPTSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQP 228
           DEPT+ LD   QA  L LL EL +  G+ VL++THD+GVV+  AD+V VME G IVE   
Sbjct: 180 DEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGT 239

Query: 229 AHELFQRPASATARTLLHA-------HQVLCRSQP 256
             E+++ P     + L+ A       H+   R++P
Sbjct: 240 VREIYKNPQHPYTQKLIAAAPGKGAMHEPGARAEP 274



 Score =  103 bits (258), Expect = 6e-27
 Identities = 83/248 (33%), Positives = 117/248 (47%), Gaps = 9/248 (3%)

Query: 5   VLEIRGLRIETQAGVLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPP--GLART 62
           +L +R +R    +   +  +   L  GE   +VG SGSGKS     LL L  P  G A  
Sbjct: 275 LLSVRDVRKTYGSFEALKGISFDLMPGETMAVVGESGSGKSTLARALLRLDEPDSGTALW 334

Query: 63  QGQLLLDGQPLAASSVRGRLTSLVLQNPRSAFNP---VRNMASHAIETLRQRGITSAVAR 119
           +G+ L    P     +R  L  +V Q+P  + NP   V  + S A   +    +  A  R
Sbjct: 335 KGRDLFALSPAELYKLRRDL-QMVFQDPTQSLNPRMTVYQLISEAW-VIHPDILPKAKWR 392

Query: 120 ARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTSDLDALS 179
            R+A  L  VGL+     +  +  Q SGG  QR+ IA AL  E   ++ DE  S LD   
Sbjct: 393 ERVAELLVQVGLSAEH--MSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSV 450

Query: 180 QARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELFQRPASA 239
           QA+ ++LL  L +  G+  + + HD+ VV   AD V VM+ G +VE     E+F  P  A
Sbjct: 451 QAQVIELLDRLRREMGIAFIFIAHDLPVVRDFADYVMVMQQGEVVELGTVREVFDTPRQA 510

Query: 240 TARTLLHA 247
             R LL A
Sbjct: 511 YTRALLAA 518