Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 541 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  157 bits (398), Expect = 3e-43
 Identities = 97/256 (37%), Positives = 138/256 (53%), Gaps = 11/256 (4%)

Query: 3   PSVLEIRGLRIETQAGV----LVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPG 58
           P VL +R L I    G      V D+   +  G+V  L+G SGSGKS+    ++ LLPPG
Sbjct: 8   PMVLSVRDLTIALPPGADRPHAVSDISFDVPPGKVVCLLGESGSGKSVIASAIMGLLPPG 67

Query: 59  LARTQGQLLLDGQPLAASS------VRGRLTSLVLQNPRSAFNPVRNMASHAIETLRQR- 111
           L   +G + L GQ L + S      +RG   ++V Q P +A NPV    +   E L Q  
Sbjct: 68  LRPVKGAIELRGQALLSCSQAALRALRGTTMAMVFQEPMTALNPVMTCGAQIDEMLAQHV 127

Query: 112 GITSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEP 171
               A  RA +   ++ V L + ER+  S+  QLSGG  QR++IA+AL+ +   L+ DEP
Sbjct: 128 KRPKAERRAAILAIMERVRLPEPERIYASYPHQLSGGQRQRIVIAMALILKPALLICDEP 187

Query: 172 TSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHE 231
           T+ LD  +QA  L L++EL + +G  VL +THD GVVA  AD+V V+E G ++E    H 
Sbjct: 188 TTALDVTTQAEILKLILELQRENGTAVLFITHDFGVVAEIADEVVVLELGAMIEKGDKHA 247

Query: 232 LFQRPASATARTLLHA 247
           +   P     + LL A
Sbjct: 248 VLTAPRQPYTKMLLAA 263



 Score =  106 bits (264), Expect = 1e-27
 Identities = 79/229 (34%), Positives = 110/229 (48%), Gaps = 11/229 (4%)

Query: 24  VDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLARTQGQLLLDGQPLAASSVRG--- 80
           V L +R GE   +VG SGSGKS     +  L+ P    T G +  DG+ +A ++ R    
Sbjct: 309 VSLMVRPGETIGIVGESGSGKSTVARCIARLIDP----TSGDIFADGRSVATATKRELSP 364

Query: 81  --RLTSLVLQNPRSAFNPVRNMASHAIETLRQRGITSAVARARMAHCLDAVGLADTERVL 138
             R   +V Q+P  + NP + +    IE     G+  A A A+    +  V L      L
Sbjct: 365 FRRHVQVVFQDPYRSLNPRQTVGESIIEGPVNFGVPRAEAWAKAEELMHLVRLKPD--AL 422

Query: 139 QSFAFQLSGGMLQRMMIALALMAETPFLLADEPTSDLDALSQARFLDLLMELVQVHGLGV 198
           + +  + SGG  QR+ IA AL      L+ADE  S LD   QA+ L LL E+     +G+
Sbjct: 423 RRYPNEFSGGQRQRISIARALACNPKVLIADEAVSALDVSVQAQILTLLEEIQGRLRIGI 482

Query: 199 LLVTHDMGVVARCADQVAVMEAGRIVECQPAHELFQRPASATARTLLHA 247
           L VTHD+ V ++  D V VM  G IVE     ++F  P     R LL A
Sbjct: 483 LFVTHDLRVASQICDHVLVMYKGEIVEEGAIRDVFFAPRHPYTRKLLAA 531