Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 670 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Dechlorosoma suillum PS

 Score =  166 bits (419), Expect = 2e-45
 Identities = 105/254 (41%), Positives = 137/254 (53%), Gaps = 11/254 (4%)

Query: 5   VLEIRGLRIETQAG----VLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPPGLA 60
           +L +R L+    AG      V  V   +  GE   L+G SG GKS + L LL LLP    
Sbjct: 4   LLSVRNLKAGFLAGGRVLTAVDGVSFAVAPGETFALLGESGCGKSATALALLRLLPNAGR 63

Query: 61  RTQGQLLLDGQPLAA------SSVRGRLTSLVLQNPRSAFNPVRNMASHAIETL-RQRGI 113
              G++ L+G+ + A         RG   +++ Q P ++ NPV  +     E+L R RG+
Sbjct: 64  IQGGEVWLEGEEILALPEAAMRDRRGSAAAMIFQEPATSLNPVLTIGRQIGESLERHRGM 123

Query: 114 TSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTS 173
               AR      L AVG+AD ER L+ + FQLSGGM QR MIA+AL  E   L+ADEPT+
Sbjct: 124 KGEAARREALALLTAVGIADPERRLEEYPFQLSGGMKQRAMIAIALAGEPRLLIADEPTT 183

Query: 174 DLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELF 233
            LD   QA+ LDLL  L     +G+LL+THD+GVVAR A +V VM AG IVE  P  E F
Sbjct: 184 ALDVTIQAQILDLLARLQAERAMGMLLITHDLGVVARSAHRVGVMYAGEIVETAPRQEFF 243

Query: 234 QRPASATARTLLHA 247
             P     + L  A
Sbjct: 244 ASPRHPYTQKLFAA 257



 Score =  115 bits (289), Expect = 2e-30
 Identities = 85/230 (36%), Positives = 115/230 (50%), Gaps = 6/230 (2%)

Query: 21  VHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLPP-GLARTQGQLLLDGQPLAASSVR 79
           V  V L+L+RG    LVG SG GK+ +   +L LLP  G  R  G+ LL G P       
Sbjct: 378 VDGVSLELQRGRTLALVGESGCGKTTAGKAVLRLLPATGSVRLDGRELL-GLPERELKPL 436

Query: 80  GRLTSLVLQNPRSAFNPVRNMASHAIETLRQRGITSA--VARARMAHCLDAVGLADTERV 137
            R   +V Q+P ++ NP   +     E +    + ++    RA +A  L++VGL      
Sbjct: 437 RRRMQMVFQDPFASLNPRLTVGEIIEEGMTALRVAASRDERRAALAALLESVGLP--AEA 494

Query: 138 LQSFAFQLSGGMLQRMMIALALMAETPFLLADEPTSDLDALSQARFLDLLMELVQVHGLG 197
           L  +  + SGG  QR+ IA AL  +   L+ DEPTS LD   QA+ L+LL  L +  GL 
Sbjct: 495 LGRYPHEFSGGQRQRIAIARALAVQPELLVCDEPTSALDVSVQAQILNLLRRLQEELGLA 554

Query: 198 VLLVTHDMGVVARCADQVAVMEAGRIVECQPAHELFQRPASATARTLLHA 247
            L +TH+  VV   A  VAVM  GRIVE  P  ++   P     R LL A
Sbjct: 555 YLFITHNFAVVEYLAHDVAVMYLGRIVEQGPVQQVLAAPCHPYTRALLSA 604