Pairwise Alignments

Query, 256 a.a., nickel ABC transporter ATP-binding subunit from Pseudomonas putida KT2440

Subject, 533 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  168 bits (425), Expect = 2e-46
 Identities = 101/258 (39%), Positives = 142/258 (55%), Gaps = 12/258 (4%)

Query: 1   MSPSVLEIRGLRI----ETQAGVLVHDVDLQLRRGEVCTLVGASGSGKSLSCLGLLDLLP 56
           MS +VL++R LR+    + Q    V  V   + +GE   LVG SGSGKS++ L  + LLP
Sbjct: 1   MSDAVLQVRNLRVGFRQDGQVTEAVKGVSFDVAQGETVALVGESGSGKSVTALSTVSLLP 60

Query: 57  PGLARTQGQLLLDGQPLAASS------VRGRLTSLVLQNPRSAFNPVRNMASHAIETLR- 109
              A   G +   G  +  +       VRG   S + Q P ++ NP+  +     E+L  
Sbjct: 61  DS-AEVSGSITYAGTEMVGAPERDLRRVRGNDVSFIFQEPMTSLNPLHPLEKQITESLTL 119

Query: 110 QRGITSAVARARMAHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETPFLLAD 169
            +G+T   ARAR+   L+ VG+ D E  L ++  QLSGG  QR+MIA+AL      L+AD
Sbjct: 120 HQGLTGDAARARVIELLEKVGIRDAESRLGAYPHQLSGGQRQRVMIAMALANGPDLLIAD 179

Query: 170 EPTSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIVECQPA 229
           EPT+ LD   QA+ LDLL +L +  G+ +L +THD+ +V R AD+V VM+ G IVE  P 
Sbjct: 180 EPTTALDVTIQAQILDLLADLKEAEGMSLLFITHDLTIVRRIADRVCVMQGGEIVETGPT 239

Query: 230 HELFQRPASATARTLLHA 247
            E+F  P     R LL A
Sbjct: 240 AEIFANPQHPYTRKLLAA 257



 Score =  103 bits (256), Expect = 1e-26
 Identities = 78/263 (29%), Positives = 128/263 (48%), Gaps = 24/263 (9%)

Query: 2   SPSVLEIRGLRI--ETQAGVL---------VHDVDLQLRRGEVCTLVGASGSGKSLSCLG 50
           +P V E   L++    Q G+L         V++  L +R GE   +VG SGSGK+   L 
Sbjct: 270 APVVAETDSLKVWFPIQRGILRRTVGHVKAVNNATLNVRAGETLGVVGESGSGKTTLALA 329

Query: 51  LLDLLPPGLARTQGQLLLDGQPLAASSVRG-----RLTSLVLQNPRSAFNPVRNMASHAI 105
           +L L+      ++G+++  G+ +     R      +   +V Q+P  + +P   +A    
Sbjct: 330 ILRLIS-----SEGRIVYAGENIQGWKSRDLRRLRKDMQVVFQDPYGSLSPRMTIAQIIA 384

Query: 106 ETLRQRGITSAVARARM-AHCLDAVGLADTERVLQSFAFQLSGGMLQRMMIALALMAETP 164
           E L   G+       RM A  L  VGL     ++  +  + SGG  QR+ IA A++    
Sbjct: 385 EGLGVHGLEPGADPRRMVAEILVEVGLDPA--MMDRYPHEFSGGQRQRIAIARAMILRPK 442

Query: 165 FLLADEPTSDLDALSQARFLDLLMELVQVHGLGVLLVTHDMGVVARCADQVAVMEAGRIV 224
            ++ DEPTS LD   Q + ++LL  L + +GL  + ++HD+ VV   + +V VM  G +V
Sbjct: 443 LVVLDEPTSALDMTVQVQIVELLRALQRKYGLAYIFISHDLKVVRALSHKVIVMRQGDVV 502

Query: 225 ECQPAHELFQRPASATARTLLHA 247
           E     ++F+RP S   + LL A
Sbjct: 503 EMGEGRQIFERPRSDYTKQLLAA 525