Pairwise Alignments

Query, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 312 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  192 bits (487), Expect = 1e-53
 Identities = 108/311 (34%), Positives = 178/311 (57%), Gaps = 8/311 (2%)

Query: 3   RYILLRLALLVPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAEVRHTLGLDR 62
           R++L R    +PV+ G S++ F+L+ L   DPA + L     P   +AIA++R   GLD 
Sbjct: 5   RFVLTRPLQFLPVIFGISIITFILVRLIPGDPARNLLGARATP---SAIAKIRAQYGLDE 61

Query: 63  PLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPLGLL 122
           P++ QY  +L N    + G S +    VL  +   +  T+ L   ++   +L+++P+  L
Sbjct: 62  PMWQQYFYFLKNLADGEMGKSILYKIDVLKLIATRVEPTIALVLSSVVLAVLIAVPMAAL 121

Query: 123 AARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPPLGRGGA-----GHLV 177
           AAR  G+ PDH VR V+  G+  P FWL  +L+ LFS+ L  LP  G G        HL+
Sbjct: 122 AARNSGKAPDHIVRVVSTFGIGFPPFWLGLMLMILFSVKLDVLPVSGYGATFGDKLAHLI 181

Query: 178 MPVLAIALMSMSINARLLRASLLDAGGQRHVTYARARGLPERHVWRDHILRNAWLPLVTA 237
           +P L +AL   ++  R LRA+++++      T ARARG+PER V+  H++ N+ +P +  
Sbjct: 182 LPSLTVALSLSTVLVRSLRAAMIESLKSDVATAARARGMPERIVFWRHVVPNSLVPTINL 241

Query: 238 TGMHIGELLGGALVIETIFAWPGVGRFAVSAVLNRDFPVMQCFTLLLTGLLMICNLIVDV 297
             ++IG L+GG +V+E++FA PG+G+  V A+ +RD+ V+Q   ++     ++ N I D+
Sbjct: 242 LAVNIGWLIGGTVVVESVFALPGMGQLLVRAIFSRDYMVVQGVAMVFACATVLVNFIADI 301

Query: 298 CYAWLDPRSRL 308
               +DPR +L
Sbjct: 302 VTVAVDPRVKL 312