Pairwise Alignments

Query, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 326 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  201 bits (512), Expect = 1e-56
 Identities = 119/322 (36%), Positives = 184/322 (57%), Gaps = 17/322 (5%)

Query: 4   YILLRLALLVPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAE-VRHTLGLDR 62
           + L RLA  +P +L   + VF+LL L   D  +D L L+ +   DA I E +RH  GLD 
Sbjct: 6   FALRRLATSIPSLLIILVGVFLLLQLAPGD-TVDAL-LAQMGGGDAQIIETLRHFYGLDA 63

Query: 63  PLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPLGLL 122
           P+  Q   +L   V  D G S I G+PV+D ++  LP TL L G +L   +   + LG+L
Sbjct: 64  PVAVQLGRYLLRLVQFDLGYSAIYGKPVIDVIVERLPVTLLLMGASLVVAVSGGVALGVL 123

Query: 123 AARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPPLG--RGGAG------ 174
           AAR   +WPD  +  +  +  + P+FWL  + + +F++ LGWLPP G    GAG      
Sbjct: 124 AARRVNKWPDTLISTLGLVFYATPSFWLGLMAVVVFAVKLGWLPPGGFEEVGAGYQGLTR 183

Query: 175 ------HLVMPVLAIALMSMSINARLLRASLLDAGGQRHVTYARARGLPERHVWRDHILR 228
                 H+ +P + ++L+ ++   R++RAS+L+      V  ARA+G+ E  +   H+LR
Sbjct: 184 ALDIARHMALPTITLSLIFLATYLRIMRASMLEVSSLDFVRTARAKGVDETKIVTHHVLR 243

Query: 229 NAWLPLVTATGMHIGELLGGALVIETIFAWPGVGRFAVSAVLNRDFPVMQCFTLLLTGLL 288
           NA LP++T  G++   +LGG++V+E++F  PG+GR A  +V+ RD   +    LL   L+
Sbjct: 244 NALLPMLTLIGLNASTMLGGSVVVESVFTLPGLGRLAYESVVQRDLNTLLGIVLLSAVLV 303

Query: 289 MICNLIVDVCYAWLDPRSRLEG 310
           ++ N IVD+ YA LDPR R +G
Sbjct: 304 IVVNFIVDLLYARLDPRIRAKG 325