Pairwise Alignments

Query, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 340 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  204 bits (518), Expect = 3e-57
 Identities = 122/310 (39%), Positives = 172/310 (55%), Gaps = 15/310 (4%)

Query: 13  VPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAEVRHTLGLDRPLYAQYLSWL 72
           V V+L  +   FVL+H    DPA      S     +  +A++R   GLD+P   Q   +L
Sbjct: 28  VAVVLVIATFNFVLVHAAPGDPAQVMAGQSG-SADEQMLAQLRADYGLDKPYPVQLAIYL 86

Query: 73  WNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPLGLLAARWQGRWPD 132
              V LD G SY   R VL  +   LPATL L   A   +L + + LG LA    G+W D
Sbjct: 87  KRIVTLDLGYSYRQQRTVLSLIAERLPATLLLTCSAFLLSLAVGVSLGTLAGVRAGKWSD 146

Query: 133 HAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPPLG--------------RGGAGHLVM 178
            A+  V+    +MP FWL  +L+ LFS+ L WLP  G              R  A HLV+
Sbjct: 147 TALTVVSLFLYAMPVFWLGLMLVLLFSVQLDWLPAFGYVTIGVQMTPFERIRDIAAHLVL 206

Query: 179 PVLAIALMSMSINARLLRASLLDAGGQRHVTYARARGLPERHVWRDHILRNAWLPLVTAT 238
           PV+++  + ++I ARL+R++++D   Q  +  ARA+GL    +   H+LRNA LP+VT  
Sbjct: 207 PVVSLGAVHLAIYARLMRSAVIDVAHQDFIKTARAKGLKRGQIIIHHMLRNAVLPVVTVA 266

Query: 239 GMHIGELLGGALVIETIFAWPGVGRFAVSAVLNRDFPVMQCFTLLLTGLLMICNLIVDVC 298
           GM  G L+GGA+VIET+FAWPG+GR    AVL RD+P+M    L+++ +++  NLI D  
Sbjct: 267 GMQAGTLVGGAVVIETVFAWPGLGRLTFDAVLQRDYPLMLGIFLVMSVIVISLNLITDAI 326

Query: 299 YAWLDPRSRL 308
           Y  +DPR  L
Sbjct: 327 YRIVDPRVSL 336