Pairwise Alignments

Query, 313 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

Subject, 326 a.a., putative peptide ABC transporter, permease protein from Phaeobacter inhibens DSM 17395

 Score =  197 bits (501), Expect = 3e-55
 Identities = 118/329 (35%), Positives = 178/329 (54%), Gaps = 20/329 (6%)

Query: 1   MLRYILLRLALLVPVMLGASLLVFVLLHLGSTDPALDYLRLSHIPPTDAAIAEVRHTLGL 60
           ML YI+ R+   V V+    L+ F +      DP  + L       T   +  +R  LGL
Sbjct: 1   MLAYIIRRIMQSVLVLFVVGLVAFSMFRFVG-DPIENMLGQER---TTEDVVRLRADLGL 56

Query: 61  DRPLYAQYLSWLWNAVHLDFGISYITGRPVLDDLLYYLPATLQLGGLALACTLLLSIPLG 120
           D+P   QY  +L NA   +FG+SY  GRPV D L+   PATL+L  ++    ++L I LG
Sbjct: 57  DQPFPVQYWRFLENAAQGNFGLSYRQGRPVADILIERAPATLELALVSGTLAMVLGIGLG 116

Query: 121 LLAARWQGRWPDHAVRAVTFLGVSMPNFWLAFLLIALFSLWLGWLPPLGRG--------- 171
           +L A  +  W  + +   + +GVS+P F +  LLI +FS+ LGWLP  GRG         
Sbjct: 117 VLTAIRRDGWLANTIMTASLIGVSLPTFLIGILLIYVFSVELGWLPSFGRGETVMLGQWS 176

Query: 172 -------GAGHLVMPVLAIALMSMSINARLLRASLLDAGGQRHVTYARARGLPERHVWRD 224
                  G   LV+P + + L  M++  RL+R+ +L+     ++ +ARARGL ER V+  
Sbjct: 177 TGFLTKSGLMSLVLPSITLGLYQMTLIMRLVRSEMLEVLRTDYIRFARARGLGERAVYFR 236

Query: 225 HILRNAWLPLVTATGMHIGELLGGALVIETIFAWPGVGRFAVSAVLNRDFPVMQCFTLLL 284
           H L N  +P++T  G+ +G ++  A++ ET+F WPGVG   ++AV   D PVM  + +L+
Sbjct: 237 HALVNTMVPVITIIGLQLGSIIAFAIITETVFQWPGVGLLFINAVQFVDIPVMAAYLMLI 296

Query: 285 TGLLMICNLIVDVCYAWLDPRSRLEGVNA 313
           + L +  NLIVD+ Y  +DPR R     A
Sbjct: 297 SVLFVGINLIVDLLYFLIDPRLRTSKAGA 325