Pairwise Alignments

Query, 683 a.a., putative TonB-dependent receptor from Pseudomonas putida KT2440

Subject, 730 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 63.2 bits (152), Expect = 4e-14
 Identities = 69/271 (25%), Positives = 120/271 (44%), Gaps = 33/271 (12%)

Query: 399 IEPFESLKIVPAYRVDKISGDFTNKMT--GQDYDINDYGLIKQPKLSIVYSPWKFASVYA 456
           IE  E+  +    R D  S    N  +  G D D  +Y      +LS++Y P +  S+YA
Sbjct: 453 IELTEAWMVNAGIRWDDYSTSAKNSTSQFGNDADFFNY------QLSVLYKPAENGSIYA 506

Query: 457 NWGRTFQ---VGTGAAAYKVPPRNEDLDPSINEGWETGVKFTPASWVDGRVAY----WRQ 509
            WG +        G  A ++   N DL+P   E +E G K+    W +GR++     ++ 
Sbjct: 507 AWGTSSNPPGTSNGDGADRLGSTNADLEPEDTESYELGTKWD--LW-EGRLSLNGSVFQI 563

Query: 510 DASGEVSRRLNDPSGESDNVGETRRWGYDLQVNLHPDERTEVWMSYS-WQY-SKILEPSS 567
           + +        D +   +NVGE +  G+++  +    + TE W  +  + Y    LE + 
Sbjct: 564 EKNNARVATSGDRNAPQENVGEQKVKGFEIGFS---GDFTEDWHGFGGYTYLDATLESNG 620

Query: 568 ALPGSKGQEIDHVPHHLWNTGISYQATPALQLTAWANGQTNYYLERE--NTQGTYG--GY 623
                 G    +   +  +   +Y  T  L +     G   YY+++   NT  T     Y
Sbjct: 621 YNAALNGNRFPNTAKNSLSLFTTYDITEQLTV-----GTGAYYMDKVYGNTANTLSIPSY 675

Query: 624 VLMNLGATYKLSETMSVDLQLKNLTN-RYYE 653
              +L ++YK+SE M++ L ++NLT+ RYY+
Sbjct: 676 WRFDLTSSYKISEFMTLRLNVQNLTDERYYD 706



 Score = 32.3 bits (72), Expect = 8e-05
 Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 15/131 (11%)

Query: 44  NVTSTESGPLATS--SVLSSVDILGGDILEKMPVTYSWELFSRAPGVMLTEFNQGTTSGK 101
           N    +SG       +   +V ++  D+++ M      +     PG+ L     G   G 
Sbjct: 58  NTRKVQSGKFTEDLLNTAKTVTVINQDLIKDMGAQSFTDALRATPGITLGTGEGGNPYGD 117

Query: 102 LSF-RGFNGEGEVNAVKLLIDGIPSNTNDGNMPFIDSVFPMDIDSIEVVRGTSDPRYGLN 160
             F RG++ +         I+G+ +  +     F       +I+ IEV++G S    G  
Sbjct: 118 RPFIRGYDAQSST-----FINGMRNVGSQSRETF-------NIEQIEVLKGPSSVYNGRG 165

Query: 161 NIAGNVNINTR 171
            + G++NI T+
Sbjct: 166 AVGGSINIVTK 176



 Score = 26.2 bits (56), Expect = 0.006
 Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 33/170 (19%)

Query: 514 EVSRRLNDPSGESDNVGETR----RWGYDLQVNLHPDERTEVWMSYSWQYSKILEPSSAL 569
           E + R+N  + ++D  G       RWG    V       T+V + Y + +     P   +
Sbjct: 209 EAAVRVNMMAHDADTPGRDEVTGNRWGVAPSVTFGLTTPTKVTLEY-YHFENHDIPDYGI 267

Query: 570 PGSK--GQEIDHVPHHLW---------------NTGISYQATPALQLTAWA--NGQTNYY 610
           P  +  G+  D  P + +               +  IS+     +Q T+ +  +  +NYY
Sbjct: 268 PYDQATGKPADVDPDNFYGLLSRDFRDTMDDTASVLISHDFNNDMQFTSTSIYSRNSNYY 327

Query: 611 L--ERENTQGTYG-GYVLMNLGATYKLSETMSVDLQLK------NLTNRY 651
           +    ++T G    GYV  N  + + +++T++  LQL         TNR+
Sbjct: 328 IVTNPDDTAGNVAKGYVWRNTKSRHSVTKTLATQLQLSGEATLAGFTNRF 377