Pairwise Alignments

Query, 733 a.a., Sensory box protein/GGDEF domain protein from Pseudomonas putida KT2440

Subject, 886 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  342 bits (878), Expect = 4e-98
 Identities = 212/599 (35%), Positives = 325/599 (54%), Gaps = 9/599 (1%)

Query: 132 LSHEGSVLGTFALYQDQAIAPSEVQIHRLTCAAQLAAIAIRHERDGQRLEESEQRFRSLF 191
           L   G V+    L +    APS      L         AI +ER GQ L   +    +  
Sbjct: 271 LRARGEVVAVLCL-RGHGEAPSPALSRALEALGPRLGEAIVYER-GQSLMRLQS---AAI 325

Query: 192 TYNPNPVFALDRAGNIQSVNPAGLKLKAGAATDLVGHHFSHLVFEEDL-PKVNQHFFAAR 250
               N +   D  G ++ VN A   L       ++G   + L       P   + +   R
Sbjct: 326 AAAANAIVITDGEGRVEWVNEAYHLLSGYERDQIIGTLPAVLAGPSAANPTAIEAWPTLR 385

Query: 251 AGEPQRFEARVRDESDDKQLIMDIANLPIM-VNGEIVGVFGIARDISKQKHYERQLSINA 309
           AG+  R E       D +  I+D    PI+  +G +  +  +  D++ +K  E ++   +
Sbjct: 386 AGQVWRGEIH-ETHRDGRTYIVDKTITPIVDASGRLSHLVAVDEDVTARKKAEERIRYLS 444

Query: 310 SHDGLTGLLNRLSLEDRLVQACRSSRQRKVQLAVMYIDLDGFKSINDSIGHYFGDQVLIE 369
           ++D LT L NR+   DRL QA   +R+    LAVM+IDLD F  +ND++GH  GD +L+ 
Sbjct: 445 NYDTLTRLPNRVLFRDRLYQAVVQARRGHGGLAVMFIDLDQFSLVNDTLGHAAGDHLLMT 504

Query: 370 VAQRLTQQVRPADTVVRMGGDEFVVLLTDLLRDEDAVPVAERLLASIGKPYCIQGIDLHV 429
           +A R+      ADTV R+GGDEF ++ T L   + A  +A RL+  I  P  + G ++ +
Sbjct: 505 IASRINAAAEEADTVARVGGDEFALIQTALTSADSAASLARRLIDVIRTPVDLGGREVVI 564

Query: 430 STSIGITVSDGHIEQPMKLIQQADMAMYKAKQQGRNNFQWYTSDLNHRVCEHRSLRNDLQ 489
             ++GI +       P  L++ ADMAMY+A + G ++  ++++++N       SL  DL+
Sbjct: 565 GANVGIAIYPQDGTDPDNLMKNADMAMYRAVKSGDDSCCFFSNEMNAEAAVRLSLEEDLR 624

Query: 490 KAIKT-QSFSLHYQPQIEARTRRVVGIEALLRWEHPVRGFISPAVFIPVAEDSGQIIPLS 548
           +A+ +     LHYQ Q    + R VG EAL RW HP  G I P  FIPVAEDSG I+ L 
Sbjct: 625 RALDSGDQLFLHYQLQFCIESGRPVGAEALARWTHPTLGAIPPTRFIPVAEDSGLILALG 684

Query: 549 LWVLDTACAQLRDLCDQGFNGISMAVNISPMHFQCGQFVECIQAVLSKHGLSAGQLELEI 608
            WVL TA A+       G   +++AVN+S + F+    VE +  +L++HG+    LELE+
Sbjct: 685 DWVLGTALAEYARWRAAGCGRLTIAVNMSAVQFRQKGLVERVTDLLAQHGVPPEDLELEL 744

Query: 609 TESLLLHNVEQAIATLHRLKDLGVRIALDDFGTGFSSLSYLKCLPIDKIKIDRSFIQDIS 668
           TES+L+ + +QA+A L  L   G+R+++DDFGTG+SSL YLK   +DK+K+D+SF++D++
Sbjct: 745 TESMLMQDADQAVAQLTALSQAGIRLSIDDFGTGYSSLGYLKLFRVDKLKVDQSFVRDVT 804

Query: 669 TNPHDAAITQGIISMAHHLSLSVVAEGVETAPQVNFLERGRCDILQGYYFARPMSHEAL 727
            + +DA I + II++ H L L V+AEGVET  Q+ +L R  CD++QGY  A P   E +
Sbjct: 805 EDGNDAVIARAIINLGHSLGLEVIAEGVETPEQMAYLRREGCDVVQGYLMAYPEPGETV 863