Pairwise Alignments

Query, 733 a.a., Sensory box protein/GGDEF domain protein from Pseudomonas putida KT2440

Subject, 878 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  367 bits (943), Expect = e-105
 Identities = 218/586 (37%), Positives = 336/586 (57%), Gaps = 12/586 (2%)

Query: 155 VQIHRLTCAAQLAAIA--IRHERDGQRLEESEQRFRSLFTYNPNPVFALDRAGNIQSVNP 212
           ++I  +T    LA +    R+    + +EE      ++F +    V   DR GNI  VN 
Sbjct: 295 LKIPAMTSEGALAGVIGMTRNISKHKEVEEQLTLATNVFKHTLEGVVITDRHGNITDVNG 354

Query: 213 AGLKLKAGAATDLVGHHFSHLVFEEDLPKVNQHFFAARAG---EPQRFEARVRDESDDKQ 269
           A  ++   +  +L+G +    +F     +  + FF A      E  ++   + +   D  
Sbjct: 355 AFYEITGYSREELLGQN--PRLFNSG--RHEKAFFDAMWNHLLETGKWNGEIWNRRKDGT 410

Query: 270 LIMDIANLPIMVN--GEIVGVFGIARDISKQKHYERQLSINASHDGLTGLLNRLSLEDRL 327
           +      +  + +  G++     +  DIS QK  E QL+  A  D LT L NR+ L  +L
Sbjct: 411 IFPQNITISTIYDELGDVRYFVAVFSDISAQKQSEAQLAHLAYFDPLTHLPNRMKLMMQL 470

Query: 328 VQACRSSRQRKVQLAVMYIDLDGFKSINDSIGHYFGDQVLIEVAQRLTQQVRPADTVVRM 387
            Q  R +++   QLA ++ID+D FK INDS GH  GD++L+E+A+RL  Q++  D + R+
Sbjct: 471 KQELRHAKRLNAQLATVFIDVDLFKHINDSFGHSIGDEMLVELAKRLRSQLQEQDVLSRI 530

Query: 388 GGDEFVVLLTDLLRDEDAVPVAERLLASIGKPYCIQ-GIDLHVSTSIGITVSDGHIEQPM 446
           GGDEFV L++ +   EDA     +L     +P+ +  G  L ++ S+G+++         
Sbjct: 531 GGDEFVALISGIQSHEDAAAAINQLRQVFEQPFVVSTGDHLRLTASMGVSIYPDDGSNAD 590

Query: 447 KLIQQADMAMYKAKQQGRNNFQWYTSDLNHRVCEHRSLRNDLQKAIKTQSFSLHYQPQIE 506
            L++ AD AMY+AK +GRNNF +YT  L  +  EH  L++ L  A++  +  L YQP+++
Sbjct: 591 TLLRNADAAMYRAKSEGRNNFAFYTESLTKQSFEHLKLQSALYGALEQNALYLMYQPKLD 650

Query: 507 ARTRRVVGIEALLRWEHPVRGFISPAVFIPVAEDSGQIIPLSLWVLDTACAQLRDLCDQG 566
             +R+ +G+EALLRW  P+ G ISP VFIPVAE  G I  + LWVL+TAC Q      +G
Sbjct: 651 LVSRKTIGVEALLRWNDPILGQISPGVFIPVAEKIGLIYDIGLWVLETACLQGVRWLTEG 710

Query: 567 FNGISMAVNISPMHFQCGQFVECIQAVLSKHGLSAGQLELEITESLLLHNVEQAIATLHR 626
                +AVN++    Q   FVE ++ +L++ GL A  LELE+TES+++HN + AI  L  
Sbjct: 711 KPFGRIAVNVAGQQLQRSSFVEDVKRILTQTGLPATCLELEVTESVMMHNPDVAIRDLKL 770

Query: 627 LKDLGVRIALDDFGTGFSSLSYLKCLPIDKIKIDRSFIQDISTNPHDAAITQGIISMAHH 686
           L DLG+ +++DDFGTG+SSL+YLK LPI K+KID+SF++DI  + ++ AI + +I++ H 
Sbjct: 771 LGDLGIELSVDDFGTGYSSLNYLKKLPIHKLKIDQSFVRDIPFDTNNTAIAKAVIALGHA 830

Query: 687 LSLSVVAEGVETAPQVNFLERGRCDILQGYYFARPMSHEALRTFLA 732
           L L +VAEGVET  Q  FL +  CD  QGY F+RP+    +  FLA
Sbjct: 831 LKLEIVAEGVETQAQAEFLTQNLCDQAQGYLFSRPLLPADVEAFLA 876