Pairwise Alignments

Query, 940 a.a., putative Chaperone-associated ATPase from Pseudomonas putida KT2440

Subject, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

 Score =  660 bits (1702), Expect = 0.0
 Identities = 369/845 (43%), Positives = 533/845 (63%), Gaps = 82/845 (9%)

Query: 128 RISEHSEALLQEAAKRATEFGRSEVDTEHLLLALADSD--VVKTILSQFKIKVDELKRQI 185
           R +   +  + +A   A       ++  HL++AL D +   ++ +L+   + V +L+ ++
Sbjct: 5   RFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQLRSKL 64

Query: 186 EAEAKRGDKPFEGEVGVSPRVKDALSRAFVASNELGH----AYVGPEHFLIGLAEEGEGL 241
                R   P    +G   ++  AL   F   +++      AY+  E +L+   E+ +G 
Sbjct: 65  GEMLDR--LPKVSGIGGDVQLSSALGSLFNLCDKVAQKRQDAYISSEIYLLAAIED-KGP 121

Query: 242 AANLLRRYGLMPQALRQCVSKVVGKGAEDGRAEAPTETPELDKYSRDLTRMARDGKLDPV 301
             +LL+ +GL  + + + + K+ G G +     A      L+K++ DLT  A  GKLDPV
Sbjct: 122 LGHLLKEFGLTEKKVSEAIEKIRG-GQKVNDPNAEELRQALEKFTIDLTERAEQGKLDPV 180

Query: 302 IGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRMVAGEVPETLRDKRLVEL 361
           IGR  EI  TI+VL RR KNNPV+IGEPGVGKTAIVEGLAQR++  EVPE LR +R++ L
Sbjct: 181 IGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSL 240

Query: 362 NINSLVAGAKYRGEFEERVQKVLKEIAEHQGELILFIDEVHTIVGAGQGGGEGGLDVANV 421
           ++ +LVAGAKYRGEFEER++ VL E+A+ +G +ILFIDE+HT+VGAG+  GEG +D  N+
Sbjct: 241 DMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHTMVGAGK--GEGSMDAGNM 298

Query: 422 FKPMMARGELNLIGATTLNEYQKYIEQDAALERRFQPVVVPEPTVAQTIMILRGLRDTFE 481
            KP +ARGEL+ +GATTL+EY++YIE+D ALERRFQ V+V EPTV  TI ILRGL++ +E
Sbjct: 299 LKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYE 358

Query: 482 AHHKVSITEEAIIAAAELSDRYVSARFLPDKAIDLLDQAAARVKLSATARPVAVQEMESE 541
            HH V IT+ AI+AAA LS RY+S R LPDKAIDL+D+AA+ +++   ++P A+ ++E +
Sbjct: 359 LHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERK 418

Query: 542 LHQLRREQDYAASRKQYDNAAQ-----ISKRVEATEAELKQRVEEWERERG--SGSTEVK 594
           + QL+ EQ   A   ++D A++     +++ ++  E +  +  E W+ E+   SG+  +K
Sbjct: 419 IIQLKIEQQ--ALSNEHDEASEKRLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIK 476

Query: 595 A--------------------------------------------EHVAQIVSRLTGIPV 610
           A                                            + +  + +++T   +
Sbjct: 477 AALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMTLLRNKVTDAEI 536

Query: 611 NELTVEER----EKLLHLEQR--------LHERLVGQDEAVRAVADAVRLSRAGLREGSK 658
            E+  ++      K+L  E+         LH+R++GQ EAV  VA+A+R SRAGL + ++
Sbjct: 537 AEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNR 596

Query: 659 PVATFLFLGSTGVGKTELAKALAETIYGDESALLRIDMSEYGERHSVARLVGAPPGYVGY 718
           P+ +FLFLG TGVGKTEL K LA  ++  E A++R+DMSE+ E+HSVARLVGAPPGYVGY
Sbjct: 597 PIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGY 656

Query: 719 DEGGQLTEKVRRKPYSVLLLDEIEKAHADVYNILLQVFDDGRLTDGKGRVVDFTNTIIIA 778
           +EGG LTE VRRKPYSV+LLDE+EKAH DV+NILLQV DDGRLTDG+GR VDF NT++I 
Sbjct: 657 EEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIM 716

Query: 779 TSNLGSDIIQRRLKAPGAAGEEYEKTKVEVMEVLRGHFRPEFLNRIDEIIVFHALGKQEI 838
           TSNLGS  IQ        A  +Y+  K +VM+V+  HFRPEFLNR+DE +VFH LG++ I
Sbjct: 717 TSNLGSSRIQENF-----ARLDYQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHI 771

Query: 839 RHIVGLQLERVARNAASQGVTLTFDETLVDHLAQVGYKPEFGARELKRLIRSELETALAR 898
           + I  +QL R+ +  A +   L  D+  +D +A VG+ P +GAR LKR I+  +E  LA+
Sbjct: 772 KSIASIQLARLRQRLAERDYQLEVDDEALDLIAHVGFDPVYGARPLKRAIQQNVENPLAK 831

Query: 899 EMLGG 903
            +L G
Sbjct: 832 SILAG 836