Pairwise Alignments

Query, 1030 a.a., RND efflux transporter from Pseudomonas putida KT2440

Subject, 1028 a.a., Cation efflux system protein from Pseudomonas fluorescens FW300-N1B4

 Score = 1572 bits (4071), Expect = 0.0
 Identities = 796/1012 (78%), Positives = 900/1012 (88%)

Query: 6    FNLSALAVRERSITLFLIVLIAFAGTLAFFKLGRAEDPPFTVKQMTIITAWPGATAQEMQ 65
            FNLSALAVRERSITLFLI+LI+  G  AFFKLGRAEDP FT+KQMT++TAWPGATAQEMQ
Sbjct: 4    FNLSALAVRERSITLFLILLISVGGLYAFFKLGRAEDPAFTIKQMTVVTAWPGATAQEMQ 63

Query: 66   DLVAEPLEKRMQELRWYDRTETYTRPGLAFTMVSLQDKTPPSAVQEEFYQARKKAGDQAK 125
            D V E LEKRMQELRWYDRTET+TRPGLAFT V L D TPPSAVQEEFYQARKK  D+ K
Sbjct: 64   DQVVEKLEKRMQELRWYDRTETFTRPGLAFTTVYLLDSTPPSAVQEEFYQARKKILDEQK 123

Query: 126  LMPAGVIGPMLNDEFSDVTFAVYALKAKGEPQRQLVRDAETLRQQLLHVPGVKKVNIIGE 185
             +P+GVIGPM+NDE+SDVTFA+YALKAKGEPQR LVR+AE+LRQ+LLHV GVKKVNIIGE
Sbjct: 124  GLPSGVIGPMVNDEYSDVTFALYALKAKGEPQRLLVREAESLRQRLLHVAGVKKVNIIGE 183

Query: 186  QAERIFVSFSHDRLATLGITPQDIFSALDNQNALSPSGSVETQGPQVVVRVDGAFDQLAK 245
            QAERIFV  S++RLATLGI+ +DIFSAL+ QN ++P+GSVE +GPQV +R+DGAFD L K
Sbjct: 184  QAERIFVELSYERLATLGISARDIFSALNTQNMITPAGSVEAKGPQVFIRLDGAFDDLQK 243

Query: 246  IRETPVVAQGRPLKLSDVADVERGYEDPATFLVRNDGEPALLLGIVMREGWNGLDLGKAL 305
            IR TP+  QGR LKLSDVA+V+RGYEDPATFLVRN+GEPALLLG+VMR+GWNGLDLGK+L
Sbjct: 244  IRNTPLTVQGRTLKLSDVAEVKRGYEDPATFLVRNNGEPALLLGVVMRDGWNGLDLGKSL 303

Query: 306  EAETAKINEGMPLGMTLSKVTDQAVNITSSVDEFMIKFFVALLVVMLVCFLSMGWRVGVV 365
            EAE   INE MPLGM+L+KVTDQAVNI +SV+EFM+KFF AL VV+LVCFLSMGWRVGVV
Sbjct: 304  EAEATAINEQMPLGMSLTKVTDQAVNIGASVNEFMVKFFAALGVVLLVCFLSMGWRVGVV 363

Query: 366  VAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYDRI 425
            VAAAVPLTLA VF+VMAATGK+FDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYDRI
Sbjct: 364  VAAAVPLTLAAVFIVMAATGKDFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYDRI 423

Query: 426  KASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWVVAVAF 485
            KASAYAWSHTAAPMLSGTLVTAIGFMPNGFA+STAGEYT+NMFWIVGIALI SWVVAV F
Sbjct: 424  KASAYAWSHTAAPMLSGTLVTAIGFMPNGFAKSTAGEYTANMFWIVGIALITSWVVAVVF 483

Query: 486  TPYLGVKLLPRIKTIEGGHAAIYNTRHYNRFRALLGWVIAHKWLVAGTVVSTFVAAVLGM 545
            TPYLGVKLLP+IK  EGGH AIY T +Y RFR LLG VI  K LVA +VV  FV A+LGM
Sbjct: 484  TPYLGVKLLPQIKVPEGGHTAIYGTPNYQRFRRLLGSVIRRKGLVAASVVGLFVVAILGM 543

Query: 546  GLVKKQFFPTSDRPEVLVELQMPYGTSIEQTNATAIKVESWLRQQEEAKIVTTYIGQGPP 605
            G+VKKQFFPTSDRPEVLVE+QMPYGTSIEQT+  A KVE+WL  Q EA+IVT YIGQG P
Sbjct: 544  GVVKKQFFPTSDRPEVLVEVQMPYGTSIEQTDVAAAKVEAWLALQSEARIVTAYIGQGAP 603

Query: 606  RFFLAMAPELPDPSFAKIVVLTENQGAREALKHRLREAASEGLAPGAQVRVTQLVFGPYS 665
            RF+LAMAPELPDPSFAKIVVLT +Q  REALK RLR+A ++GLAP A+VRVTQLVFGPYS
Sbjct: 604  RFYLAMAPELPDPSFAKIVVLTTSQQEREALKLRLRQAVADGLAPEARVRVTQLVFGPYS 663

Query: 666  PYPVAYRVMGPDASQLRQIAARVQSVLQASPMMKTVNTDWGPLVPTLHFSLNQDRLQSVG 725
            PYPVA+RVMG D + LR IAA+V+ V+ ASPMM+TVNTD G   P LH +L+QDRLQ+ G
Sbjct: 664  PYPVAFRVMGADPAVLRDIAAQVREVMTASPMMRTVNTDLGERAPALHLTLDQDRLQAFG 723

Query: 726  LTSASVSQQLQFLLTGVPITSVREDIRSVQVVGRAAGQIRLDPAQIENFTLVGSNGQRVP 785
            LTS  V+QQLQFLLTGVP+T VREDIRSVQVV R+AG+ RLDP++I  FTL G+ GQRV 
Sbjct: 724  LTSTDVAQQLQFLLTGVPVTEVREDIRSVQVVARSAGETRLDPSKIAAFTLTGAQGQRVS 783

Query: 786  VSQIGDVSIRMEDPILRRRDRTPTMTVRGDIAEGLQPPDVSTAIWKDLQPIVTQLPAGYK 845
            +SQ+G V +RME+PILRRRDRTPT+TVRGD+AEGLQPPDVS A+   LQPI+ +LPAGY+
Sbjct: 784  LSQVGAVDVRMEEPILRRRDRTPTITVRGDVAEGLQPPDVSNALITQLQPIIEKLPAGYR 843

Query: 846  IEMAGSIEESAKASQAIVPLLPIMIALTLLIIILQVRSISAMVMVFLTSPLGLIGVVPVL 905
            IE AGSIEES KA++A++PL PIMIAL LL II+QVRS+SAM+MVF T+PLGLIGVVP+L
Sbjct: 844  IEFAGSIEESGKANKALLPLFPIMIALMLLTIIIQVRSMSAMMMVFATAPLGLIGVVPIL 903

Query: 906  LLFGQPFGINALVGLIALSGILMRNTLILIGQIDHNQLEGLAPFDAVVEATVQRARPVLL 965
            LLF QPFGINALVGLIALSGILMRNTLILIGQI  N+  GL+P++AVVEATVQRARPV+L
Sbjct: 904  LLFQQPFGINALVGLIALSGILMRNTLILIGQIHSNEQAGLSPYNAVVEATVQRARPVIL 963

Query: 966  TALAAILAFIPLTHSVFWGTLAYTLIGGTFVGTIMTLVFLPAMYSIWFKIRP 1017
            TALAA+LAFIPLTHSVFWGTLAYTLIGGTF GT++TLVFLPAMY++WFKI+P
Sbjct: 964  TALAAMLAFIPLTHSVFWGTLAYTLIGGTFAGTVLTLVFLPAMYALWFKIKP 1015