Pairwise Alignments

Query, 1030 a.a., RND efflux transporter from Pseudomonas putida KT2440

Subject, 1070 a.a., Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA from Xanthomonas campestris pv. campestris strain 8004

 Score =  269 bits (687), Expect = 9e-76
 Identities = 272/1074 (25%), Positives = 460/1074 (42%), Gaps = 111/1074 (10%)

Query: 12   AVRERSITLFLIVLIAFAGTLAFFKLGRAEDPPFTVKQMTIITAWPGATAQEMQDLVAEP 71
            A+ +R + L L  ++   G  +F +L     P  T  Q+ + TA PG +  E +  V  P
Sbjct: 9    AIAQRWLMLALTGVLIAIGAWSFSRLPIDATPDITNVQVQVNTAAPGYSPLESEQRVTFP 68

Query: 72   LEKRMQELRWYDRTETYTRPGLAFTMVSLQDKTPPSAVQEEFYQARKKAGDQAKLMPAGV 131
            LE  +  L   + T + +R GL+       D T       + Y AR++  ++ + + +  
Sbjct: 69   LETVLAGLPGLESTRSLSRYGLSQVTAVFADGT-------DLYFARQQVAERLQQVKSQ- 120

Query: 132  IGPMLNDEFSDVTFAV-----YALKAKGEPQRQ-----LVRDAETL-----RQQLLHVPG 176
            + P L  +   +   +     Y ++AK   ++         D  TL     R QL +VPG
Sbjct: 121  LPPELEPQLGPIATGLGEIFMYTVEAKPNARKADGSAWTATDLRTLQDWVVRPQLRNVPG 180

Query: 177  VKKVNIIGEQAERIFVSFSHDRLATLGITPQDIFSALDNQNALSPSGSVETQGPQVVVRV 236
            V +VN IG  A +I ++    RL  LG T  D+  A++  N    +G +E  G Q +VRV
Sbjct: 181  VTEVNTIGGHARQIHITPDPARLVALGFTLDDVAQAVEANNRNVGAGYIERSGQQFLVRV 240

Query: 237  DGAFDQLAKIRETPVVA-QGRPLKLSDVADVERGYEDPATFLVRN-----DGEPALLLGI 290
             G  D +A+I    +   +G P+++ DVA V  G E      +RN     DG   +L  +
Sbjct: 241  PGQVDDIAQIGAIVLDRREGVPIRVRDVAQVGEGRE------LRNGAATQDGTEVVLGTV 294

Query: 291  VMREGWNGLDLGKALEAETAKINEGMPLGMTLSKVTDQAVNITSSVDEFMIKFFVALLVV 350
             M  G N   + +A        N  +P G+    V D+   +  ++           L+V
Sbjct: 295  FMLVGANSRTVAQAAAQRLELANASLPAGVRAVPVYDRTALVDRTIVTVAKNLIEGALLV 354

Query: 351  MLVCFLSMG-WRVGVVVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAII 409
            ++V FL +G  R  ++ AA +PL +      M   G + + ++LG+L    GL+VD A+I
Sbjct: 355  IVVLFLMLGNVRAALITAAVIPLAMLFTLTGMVRGGVSGNLMSLGAL--DFGLIVDGAVI 412

Query: 410  AIEMMVVKMEEGY----------DRIKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQST 459
             +E  + +  E            +R   +A A +    P L G  + A  ++P       
Sbjct: 413  IVENCLRRFGEAQARLGRVLERDERFALTAEATAEVIRPSLFGVGIIAAVYLPVFALTGI 472

Query: 460  AGEYTSNMFWIVGIALIASWVVAVAFTPYLGVKLLPRIKTIEGGHAAIYNTRHYNRFRA- 518
             G+    M   V +AL  + ++++ F P     LL       GG  A +  R     R  
Sbjct: 473  EGKMFHPMAVTVVLALTGAMLLSLTFVPAAIALLL-------GGKVAEHENRAMRWARGV 525

Query: 519  ---LLGWVIAH-KWLVAGTVVSTFVAAVLGMGLVKKQFFPTSDRPEVLVELQMPYGTSIE 574
               LL  V+ H +W+  G + +  + A L   L   +F P  D  ++ +      GTS+E
Sbjct: 526  YAPLLDRVLRHARWVGIGALTTVVLCAALATRL-GSEFIPNLDEGDIALHAMRIPGTSLE 584

Query: 575  QTNATAIKVESWLRQQEEAKIVTTYIGQG-------PPRF---FLAMAP--ELPDPSFAK 622
            Q  +    +E  ++Q  E   V   +G         PP     FL M P  + PDP   K
Sbjct: 585  QAISMQATLERRIKQFPEVAHVFGKLGTAEVATDPMPPSVADTFLIMHPREQWPDPRKPK 644

Query: 623  IVVLTENQGAREALKHRLREAASEGLAPGAQVRVTQLVFGPYSPYPVAYRVMGPDASQLR 682
              ++ E + A   L     E          Q+R+ +L+ G  +   VA ++ G D   L 
Sbjct: 645  AQLVAEIEAAVRQLPGNNYEFTQP-----IQMRMNELISGVRAD--VAIKLYGDDLDTLV 697

Query: 683  QIAARVQSVLQASPMMKTVNTDWGPLVPTLHFSLNQDRLQSVGLTSASVSQQLQFLLTGV 742
             +  R++++ ++ P    V  +    +P L    ++D L   GL    V   +   + G 
Sbjct: 698  TVGRRIEAIARSVPGAADVGLEQSTGLPMLAVVPDRDALAGYGLNPGVVQDTVAAAVGGQ 757

Query: 743  PITSVREDIRSVQVVGRAAGQIRLDPAQIENFTL-VGSNGQR------------------ 783
            P   + +  R   +V R    +R DP  + +  + +  +G+R                  
Sbjct: 758  PAGQLFDGDRRFDIVVRLPEALRQDPTALADLPIPLQGDGERNDADESSRAAGWRSGAPT 817

Query: 784  -VPVSQIGDVSIRMEDPILRRRDRTPTMTVRGDIAEGLQPPDVSTAIWKDLQPIVTQ--L 840
             VP+ ++  +   +    + R D    + +  ++ +     D+ + + +  Q +  +  L
Sbjct: 818  TVPLREVARIESVLGPNQINREDGKRRIVITANVRDR----DLGSFVAEVQQRVQAEVAL 873

Query: 841  PAGYKIEMAGSIEESAKASQAIVPLLPIMIALTLLIIILQVRSISAMVMVFLTSPLGLIG 900
            P GY I   G+ E+   A Q +  ++P  + L   ++     S+   V+VF   PL L G
Sbjct: 874  PTGYWIGYGGTFEQLISAGQRLAWVVPATLLLIFALLYWSFGSLRDAVVVFSGVPLALTG 933

Query: 901  VVPVLLLFGQPFGINALVGLIALSGILMRNTLILIGQIDHNQLEGLAPFDAVVEATVQRA 960
             V  L L G    I+A VG IALSG+ + N L++I  I   +  G+    A+ E  + R 
Sbjct: 934  GVVALALRGLSLSISAGVGFIALSGVAVLNGLVMIAFIRGLRDAGMPLEQALREGALARL 993

Query: 961  RPVLLTALAAILAFIPLTHSVFWGT-----LAYTLIGGTFVGTIMTLVFLPAMY 1009
            RPVL+TAL A L F+P+  +V  G      LA  +IGG    T++TL+ LP +Y
Sbjct: 994  RPVLMTALVAALGFVPMAFNVGAGAEVQRPLATVVIGGIVSSTLLTLLVLPVLY 1047