Pairwise Alignments

Query, 1030 a.a., RND efflux transporter from Pseudomonas putida KT2440

Subject, 1036 a.a., Cation/multidrug efflux protein from Sinorhizobium meliloti 1021

 Score = 1341 bits (3470), Expect = 0.0
 Identities = 658/1016 (64%), Positives = 821/1016 (80%)

Query: 4    LRFNLSALAVRERSITLFLIVLIAFAGTLAFFKLGRAEDPPFTVKQMTIITAWPGATAQE 63
            + FNLSALAVRER++TLF IVL+A AG  AF  LGRAEDP FT+K +T+ T WPGATA+E
Sbjct: 1    MSFNLSALAVRERAVTLFFIVLLAAAGVYAFMSLGRAEDPSFTIKTLTVTTVWPGATARE 60

Query: 64   MQDLVAEPLEKRMQELRWYDRTETYTRPGLAFTMVSLQDKTPPSAVQEEFYQARKKAGDQ 123
            MQDLVAEPLEKR+QEL WYDR ET TRPG AF  V+L+D TPP+AV+EEFYQARKK GD+
Sbjct: 61   MQDLVAEPLEKRIQELTWYDRVETTTRPGYAFLTVTLKDSTPPTAVEEEFYQARKKLGDE 120

Query: 124  AKLMPAGVIGPMLNDEFSDVTFAVYALKAKGEPQRQLVRDAETLRQQLLHVPGVKKVNII 183
            A+ +P+GV GP +NDE+SDV+FA+YALKAKG P R+LVR AE +RQ LLHVPGVKK+NI+
Sbjct: 121  ARNLPSGVFGPFVNDEYSDVSFALYALKAKGMPMRELVRQAEVIRQDLLHVPGVKKINIL 180

Query: 184  GEQAERIFVSFSHDRLATLGITPQDIFSALDNQNALSPSGSVETQGPQVVVRVDGAFDQL 243
            GE+ E+IFV FS+ +LATLGI+ QDI +AL  QN ++P+GS++T+GPQV +R DGA++ +
Sbjct: 181  GERPEQIFVEFSYAKLATLGISAQDIAAALQRQNTVTPAGSIDTRGPQVFIRFDGAYNSV 240

Query: 244  AKIRETPVVAQGRPLKLSDVADVERGYEDPATFLVRNDGEPALLLGIVMREGWNGLDLGK 303
              I  TP+VA GR LKLSD A+V RGYEDPAT+++R++GEPA++LG VM++GWNGL+LGK
Sbjct: 241  QAIAATPIVAAGRTLKLSDFAEVRRGYEDPATYIIRHEGEPAIMLGAVMQQGWNGLELGK 300

Query: 304  ALEAETAKINEGMPLGMTLSKVTDQAVNITSSVDEFMIKFFVALLVVMLVCFLSMGWRVG 363
            ALE  +A I   +PLGMTL+KV+DQAVNI ++V EFM+KF +AL VV+LV  LS+GWRVG
Sbjct: 301  ALEERSAAIARTLPLGMTLAKVSDQAVNIDAAVGEFMLKFAMALGVVLLVSLLSLGWRVG 360

Query: 364  VVVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYD 423
            +VVA AVPLTLA+VF++M  TG+ FDRITLG+LILALGLLVDDAIIAIE+MVVKMEEG D
Sbjct: 361  IVVALAVPLTLAVVFLIMLETGRFFDRITLGALILALGLLVDDAIIAIEVMVVKMEEGMD 420

Query: 424  RIKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWVVAV 483
            RIKA+AYAWSHTAAPMLSGTLVT IG MP GFA+STAGEY  N+FW+VG ALI SWVVAV
Sbjct: 421  RIKAAAYAWSHTAAPMLSGTLVTIIGLMPVGFARSTAGEYAGNIFWVVGFALIVSWVVAV 480

Query: 484  AFTPYLGVKLLPRIKTIEGGHAAIYNTRHYNRFRALLGWVIAHKWLVAGTVVSTFVAAVL 543
             FTPYLGVK+LP IK +EGGH AIY+T +Y R R ++ + + HK++    V      +V+
Sbjct: 481  IFTPYLGVKMLPDIKPVEGGHHAIYDTPNYRRLRGIIEFAVRHKYVTCAVVGIVMALSVV 540

Query: 544  GMGLVKKQFFPTSDRPEVLVELQMPYGTSIEQTNATAIKVESWLRQQEEAKIVTTYIGQG 603
            GMG VK QFFPTSDRPEVLVE++MP G SIE T AT  K+E WL++Q EA I+T+YIGQG
Sbjct: 541  GMGGVKHQFFPTSDRPEVLVEVRMPEGASIETTIATVEKLERWLQEQPEADILTSYIGQG 600

Query: 604  PPRFFLAMAPELPDPSFAKIVVLTENQGAREALKHRLREAASEGLAPGAQVRVTQLVFGP 663
             PRFF AMAPELPDP+FAKIVVLT +  AREALK RLR A S+GL P   VRVTQLVFGP
Sbjct: 601  APRFFFAMAPELPDPAFAKIVVLTPDSHAREALKLRLRAAVSDGLVPEGYVRVTQLVFGP 660

Query: 664  YSPYPVAYRVMGPDASQLRQIAARVQSVLQASPMMKTVNTDWGPLVPTLHFSLNQDRLQS 723
            Y+P+PV +R+MGPD +QL QI+ +   +++  P ++  N DWG   P L F  +QDRL  
Sbjct: 661  YTPFPVEFRIMGPDPAQLYQISEKALEIMKGVPDVRQANRDWGNRTPVLRFVPDQDRLNL 720

Query: 724  VGLTSASVSQQLQFLLTGVPITSVREDIRSVQVVGRAAGQIRLDPAQIENFTLVGSNGQR 783
            +GL+ A  +QQ+Q LL+G+P+T VRE+IR+V VV R+AG+ RLDPA++ +F+L+  +G++
Sbjct: 721  IGLSPAEAAQQMQLLLSGIPVTQVRENIRNVPVVARSAGESRLDPARLADFSLMSRDGRQ 780

Query: 784  VPVSQIGDVSIRMEDPILRRRDRTPTMTVRGDIAEGLQPPDVSTAIWKDLQPIVTQLPAG 843
            VP+ QIG   IR E+PIL+RRDRTP +T+R DI E  QPP+VS  I   LQP++  LP G
Sbjct: 781  VPLDQIGHSEIRFEEPILKRRDRTPVITIRSDINEATQPPEVSQQIMTALQPLIASLPVG 840

Query: 844  YKIEMAGSIEESAKASQAIVPLLPIMIALTLLIIILQVRSISAMVMVFLTSPLGLIGVVP 903
            Y+IEM G+IEES KA+ A+V + P MIA  L++IILQVRS+S M MV LT+PLGL GVVP
Sbjct: 841  YRIEMGGNIEESLKANVALVKIFPAMIAAMLIVIILQVRSLSTMTMVMLTAPLGLAGVVP 900

Query: 904  VLLLFGQPFGINALVGLIALSGILMRNTLILIGQIDHNQLEGLAPFDAVVEATVQRARPV 963
            VLLLF QPFG NA++GLI L+GILMRNTLIL  QI  N+  GL  + AV+EATVQR RPV
Sbjct: 901  VLLLFNQPFGFNAILGLIGLAGILMRNTLILTEQIKENKAAGLHDYHAVIEATVQRTRPV 960

Query: 964  LLTALAAILAFIPLTHSVFWGTLAYTLIGGTFVGTIMTLVFLPAMYSIWFKIRPNS 1019
            +LTALAA+LAF+PLTHSVFWG++AYTLIGGT VGT+M L+FLPA+Y+ WF+I+P +
Sbjct: 961  ILTALAAVLAFVPLTHSVFWGSMAYTLIGGTAVGTVMILLFLPALYAAWFRIKPTA 1016