Pairwise Alignments

Query, 1030 a.a., RND efflux transporter from Pseudomonas putida KT2440

Subject, 1083 a.a., cation/multidrug efflux pump from Dechlorosoma suillum PS

 Score =  275 bits (702), Expect = 2e-77
 Identities = 250/1074 (23%), Positives = 450/1074 (41%), Gaps = 87/1074 (8%)

Query: 18   ITLFLIVLIAFAGTLAFFKLGRAEDPPFTVKQMTIITAWPGATAQEMQDLVAEPLEKRMQ 77
            +T  L +++   G  A     R E+P   V    ++  +PGA+++++++LVA P E+ + 
Sbjct: 16   MTPLLALVLLLLGLFAVMVTPREEEPQIDVTMANVVVPFPGASSKDVENLVATPGEQVLS 75

Query: 78   ELRWYDRTETYTRPGLAFTMVSLQDKTPPSAVQEEFYQARKKAGDQAKLMPA--GVIGPM 135
             +   D   + +RPG+A   V  +            Y       D    +PA  GV  P+
Sbjct: 76   RMTGVDHVFSVSRPGMAVITVQFEVGVKNQDALVRLYDTVHSNRDW---LPANLGVGEPI 132

Query: 136  LNDEFSD------VTFAVYALKAKGEPQRQLVRDAETLRQQLLHVPGVKKVNIIGEQAER 189
            +  +  D      +TF     +      +Q+ R AE    +  H+ G + V  +G     
Sbjct: 133  VKPKGIDDVPIVSLTFWTRDSRRSAFELQQIARSAEV---EFKHLAGTRDVTTLGGPDHV 189

Query: 190  IFVSFSHDRLATLGITPQDIFSALDNQNALSPSGSVETQGPQVVVRVDGAFDQLAKIRET 249
            I V+   +R+   G+T QD+  AL   N   PSG +   G +++V      +    ++  
Sbjct: 190  IRVAMDAERMNAYGVTAQDLRDALQIANNEQPSGRLVEGGREMLVHTGTLIESAQDVKNL 249

Query: 250  PVVAQG-----RPLKLSDVADVERGYEDPATFL------------VRNDGE--------P 284
             V  +      +P+ L+DVA VE G + P  ++            +   GE        P
Sbjct: 250  VVAVRSEGSIRKPVFLADVATVEDGPDQPKRYVWFGAGPAAAQRGIAAGGEDASPDGTYP 309

Query: 285  ALLLGIVMREGWNGLDLGKALEAETAKINEGM-PLGMTLSKVTDQAVNITSSVDEFMIKF 343
            A+ L I  + G N  D+  A+ A    +   + P G+ ++   +     T    + + K 
Sbjct: 310  AVTLAISKKPGVNAADVADAVIARAESLKGSLIPEGVEVTVTRNYGATATEKAQKLIGKL 369

Query: 344  FVALLVVMLVCFLSMGWRVGVVVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLL 403
              A   V+L+ F ++G R  ++V  AV LTLA       A G   +R++L +LI ++G+L
Sbjct: 370  VFATAFVVLLVFFALGRREALIVGIAVSLTLAATLFASWAWGFTLNRVSLFALIFSIGIL 429

Query: 404  VDDAIIAIEMMV--VKMEEGYDRIKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAG 461
            VDDAI+ +E +     +      ++    A      P +  TL      +P  F     G
Sbjct: 430  VDDAIVVVENIHRWKLLHPEKTLLELIPGAVDEVGGPTILATLTVIAALLPMAFVTGLMG 489

Query: 462  EYTSNMFWIVGIALIASWVVAVAFTPYLGVKLLPRIKTIEGGHAAIYNT------RHYNR 515
             Y S +     + +  S  VA   TP+L  KLL       GGH A          R +++
Sbjct: 490  PYMSPIPINSSLGMAISLAVAFIVTPWLAAKLLAH----GGGHGADDGKVAGKLDRLFHK 545

Query: 516  ----FRALLGWVIAHKWLVAGTVVSTFVAAVLGM-GLVKKQFFPTSDRPEVLVELQMPYG 570
                F        A K L  G + + F++  L +  LV  +  P  ++ E  V L MP G
Sbjct: 546  VLPPFLDERSGAAARKKLFLGVLAAIFLSVSLAVVKLVVLKMLPFDNKSEFQVVLDMPVG 605

Query: 571  TSIEQTNATAIKVESWLRQQEEAKIVTTYIGQGPPRFFLAMAPEL---PDPSFAKIVVLT 627
            T +E+T      + + L+Q  E      Y G   P  F  +  +     +P    I V  
Sbjct: 606  TPLEETARVLKDIGAVLQQVPEVTDYQAYAGTASPINFNGLVRQYYLRSEPEMGDIQVNL 665

Query: 628  ENQGAREALKHRLREAASEGLAPGAQ-----VRVTQLVFGPYSPYPVAYRVMGPDASQLR 682
             ++  R    H +  A    +  GA+      +V ++  GP    P+   + GP+ +   
Sbjct: 666  VDKHHRSRQSHEIAVAVRAEIEAGARRAGGNAKVVEVPPGPPVMSPIVAEIYGPEEAGRI 725

Query: 683  QIAARVQSVLQASPMMKTVNTDWGPLVPTLHFSLNQDRLQSVGLTSASVSQQLQFLLTGV 742
             +A +V+ V + +P   +V+             +NQ +   +G+    + + ++  L G 
Sbjct: 726  AVAKQVRGVFEKAPDFTSVDDSVQADAEKTVLRVNQTKAAQLGVAQKDIVEVVRMGLAGE 785

Query: 743  PITSVREDIRSVQVVGRAA--GQIRLDPAQIENFTLVGSNGQRVPVSQIGDVSIRMEDPI 800
             +T         ++  R     +++     +    +   +G  VPVS++ +V     +  
Sbjct: 786  DVTPAHNQDSKYEIPVRITLPAEVQSSLDALLRLKVRARSGALVPVSEVVEVRRLAREKA 845

Query: 801  LRRRDRTPTMTVRGDIAEGLQPP----------------DVSTAIWKDLQPIVTQLPA-- 842
            +  +D  P + V GD+   L  P                D        L     + PA  
Sbjct: 846  IYHKDLLPVVYVYGDMGGDLDSPLYGMFAARGDIVGMNLDGLKGAGGTLADTFIRQPADP 905

Query: 843  --GYKIEMAGSIEESAKASQAIVPLLPIMIALTLLIIILQVRSISAMVMVFLTSPLGLIG 900
              G+ ++  G  + + +  + +     + + L  L+++   +S    +++    PL +IG
Sbjct: 906  YAGFSLKWDGEWQITYETFRDMGAAYGVGLILIYLLVVAHFKSYVTPLIIMAPIPLTIIG 965

Query: 901  VVPVLLLFGQPFGINALVGLIALSGILMRNTLILIGQIDHNQLEGLAPFDAVVEATVQRA 960
            V+P   L    F   +++G+IAL+GI++RN+++L+  I     +G+   +A+V A   RA
Sbjct: 966  VMPGHALLRSQFTATSMIGMIALAGIIVRNSILLVDFIKEETAKGMPFKEAIVTAAAVRA 1025

Query: 961  RPVLLTALAAILAFIPLTHSVFWGTLAYTLIGGTFVGTIMTLVFLPAMYSIWFK 1014
            +P+ LTALAA+L  + +     +  LA +LI G  V T++TLV +P +Y   FK
Sbjct: 1026 KPIALTALAAMLGALFILDDPIFNGLAISLIFGILVSTLLTLVVIPVLYYATFK 1079