Pairwise Alignments

Query, 1030 a.a., RND efflux transporter from Pseudomonas putida KT2440

Subject, 1067 a.a., cation/multidrug efflux pump from Dechlorosoma suillum PS

 Score =  814 bits (2102), Expect = 0.0
 Identities = 431/1043 (41%), Positives = 641/1043 (61%), Gaps = 31/1043 (2%)

Query: 5    RFNLSALAVRERSITLFLIVLIAFAGTLAFFKLGRAEDPPFTVKQMTIITAWPGATAQEM 64
            RFN+S   +R  ++ L+ +V +   G LA+ KLG++EDPPFT K M + TAWPGA+AQE+
Sbjct: 3    RFNISEWGLRHPALVLYFMVALTLVGLLAYSKLGQSEDPPFTFKVMVVRTAWPGASAQEV 62

Query: 65   QDLVAEPLEKRMQELRWYDRTETYTRPGLAFTMVSLQDKTPPSAVQEEFYQARKKAGDQA 124
            +  V E +EK +Q + + D   +Y+RPG +      +D TP +AV + +YQ RKK GD  
Sbjct: 63   ERQVTEKIEKTLQSVPYADIIRSYSRPGESMIFFQAKDATPAAAVPDIWYQVRKKVGDMR 122

Query: 125  KLMPAGVIGPMLNDEFSDVTFAVYALKAKGEPQRQLVRDAETLRQQLLHVPGVKKVNIIG 184
              +P G+ GP  NDEF DV   +YA+   G    +L R AE +R +LL V  V KV+  G
Sbjct: 123  YTLPKGIEGPTFNDEFGDVYGNLYAVVGDGFGYTELKRQAEAIRAELLRVKDVAKVDFFG 182

Query: 185  EQAERIFVSFSHDRLATLGITPQDIFSALDNQNALSPSGSVETQGPQVVVRVDGAFDQLA 244
            EQ ER+++  S+ +LATLGI    + +AL NQNA+  +GS +T    + + V G +D L 
Sbjct: 183  EQKERVYIELSNAKLATLGIDGAAVVAALQNQNAVLAAGSFDTPSEHIRIDVSGRYDDLT 242

Query: 245  KIRETPVVAQGRPLKLSDVADVERGYEDPATFLVRNDGEPALLLGIVMREGWNGLDLGKA 304
             +RET + A GR ++L D+A + RGYEDP T  +R  G+ A+L+G+ M +G + + LG  
Sbjct: 243  ALRETRLRANGREVRLGDIASIGRGYEDPPTQKIRYMGKEAVLIGVSMAKGGDIIRLGGG 302

Query: 305  LEAETAKINEGMPLGMTLSKVTDQAVNITSSVDEFMIKFFVALLVVMLVCFLSMGWRVGV 364
            L+   A I + +P+G+ L  V+ Q   +  SV+EF+     A+++V+ V  LS+G R G+
Sbjct: 303  LDGAVASIQDRLPVGLELHTVSSQPQAVQRSVNEFVRSLIEAVIIVLGVSLLSLGLRTGI 362

Query: 365  VVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYDR 424
            VVA  +P+ LAI F+ M   G    +I+LG+LILALGLLVDDAIIA+EMM  KME+G+ R
Sbjct: 363  VVAITIPVVLAITFLFMQIFGVGLHKISLGALILALGLLVDDAIIAVEMMATKMEQGWAR 422

Query: 425  IKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWVVAVA 484
             KA+++A+  TA PMLSGTLVTA GF+P   A S  GEYT ++F +  IAL+ SWV AV 
Sbjct: 423  AKAASFAYESTAMPMLSGTLVTAAGFLPIATAASATGEYTRSIFQVTVIALLISWVAAVL 482

Query: 485  FTPYLGVKLLP-----RIKTIEGGHAA-------------------------IYNTRHYN 514
            F PYLG KLLP     R+   E G  +                         IY T  Y 
Sbjct: 483  FVPYLGYKLLPDFAHHRVAHQEPGRLSRWLMRRLPWLERWLHKEPHTHSEHDIYATPFYR 542

Query: 515  RFRALLGWVIAHKWLVAGTVVSTFVAAVLGMGLVKKQFFPTSDRPEVLVELQMPYGTSIE 574
            RFRAL+   +  +WLV G  V  FVA+++G GLV++QFFP S RPE++V+L++  G S +
Sbjct: 543  RFRALVDACVRRRWLVIGITVGAFVASIVGFGLVQQQFFPDSTRPELIVDLRLAEGASWD 602

Query: 575  QTNATAIKVESWLRQQEEAKIVTTYIGQGPPRFFLAMAPELPDPSFAKIVVLTENQGARE 634
              +A A ++ESWL +Q     V  Y+G G PRF+L +  ++P  +FA+ V+LT+    RE
Sbjct: 603  AADAEAKRLESWLAEQPGIDNVVAYVGTGSPRFYLPLDQQMPQKNFAQFVILTQGSPERE 662

Query: 635  ALKHRLREAASEGLAPGAQVRVTQLVFGPYSPYPVAYRVMGPDASQLRQIAARVQSVLQA 694
             L+ +L +       P  +  + +L  GP   +PV +RV GPD + LR  A  V  V++A
Sbjct: 663  TLRSKLIDLFEHDF-PSLRAAINRLENGPPVGFPVQFRVAGPDLNVLRGYAHEVAQVMRA 721

Query: 695  SPMMKTVNTDWGPLVPTLHFSLNQDRLQSVGLTSASVSQQLQFLLTGVPITSVREDIRSV 754
            +P +  V+ DW      +  +++Q + + +G+TS+ ++  +   L G  +T  R+    V
Sbjct: 722  NPSLANVHLDWEEPAKVVRLTVDQSKARLLGVTSSDIANLINTALKGQSVTEFRDGAELV 781

Query: 755  QVVGRAAGQIRLDPAQIENFTLVGSNGQRVPVSQIGDVSIRMEDPILRRRDRTPTMTVRG 814
             V  R     R   + + +  L    G+ VP+SQ+  +    E+ I+ RR+R PT+TVRG
Sbjct: 782  DVHLRGTEMERRRLSLLPDLMLPTRAGKAVPLSQVATLEYGFEEGIVWRRNRVPTITVRG 841

Query: 815  DIAEGLQPPDVSTAIWKDLQPIVTQLPAGYKIEMAGSIEESAKASQAIVPLLPIMIALTL 874
            +I   +Q P VS  + K LQ I   LP GY +E+ G++EESAK   ++   +P+   + L
Sbjct: 842  NIYGHMQGPVVSAQVEKSLQSIKASLPLGYTLEVGGAVEESAKGGASVAAGVPLFFLVVL 901

Query: 875  LIIILQVRSISAMVMVFLTSPLGLIGVVPVLLLFGQPFGINALVGLIALSGILMRNTLIL 934
             +++LQ++S S + MV LT+PLGL+GV   LLLF +PFG  A++G IALSG++MRN++IL
Sbjct: 902  TVLMLQLQSFSKVAMVLLTAPLGLVGVTAFLLLFNKPFGFVAMLGTIALSGMIMRNSVIL 961

Query: 935  IGQIDHNQLEGLAPFDAVVEATVQRARPVLLTALAAILAFIPLTHSVFWGTLAYTLIGGT 994
            + QID ++  G   ++A+V++TV+R RP++LTA AAILA IPLT S F+G +A  ++GG 
Sbjct: 962  VDQIDQDEKAGKPRWEAIVDSTVRRLRPIVLTAAAAILAMIPLTRSAFFGPMAVAIMGGL 1021

Query: 995  FVGTIMTLVFLPAMYSIWFKIRP 1017
             V T++TL+FLPA+Y+ W K++P
Sbjct: 1022 TVATLLTLIFLPALYAAWHKVKP 1044