Pairwise Alignments

Query, 1030 a.a., RND efflux transporter from Pseudomonas putida KT2440

Subject, 1029 a.a., cation/multidrug efflux pump from Klebsiella michiganensis M5al

 Score = 1703 bits (4411), Expect = 0.0
 Identities = 853/1028 (82%), Positives = 954/1028 (92%), Gaps = 1/1028 (0%)

Query: 1    MSQLRFNLSALAVRERSITLFLIVLIAFAGTLAFFKLGRAEDPPFTVKQMTIITAWPGAT 60
            MS  +FNLSALAVRERSITLFLI+LI  AG L+FF+LGRAEDPPFTVKQMTII+AWPGAT
Sbjct: 1    MSDGKFNLSALAVRERSITLFLIILITVAGVLSFFELGRAEDPPFTVKQMTIISAWPGAT 60

Query: 61   AQEMQDLVAEPLEKRMQELRWYDRTETYTRPGLAFTMVSLQDKTPPSAVQEEFYQARKKA 120
            AQEMQD VAEPLEKRMQEL+WYDR+ETYTRPGLA+TM+SLQD TPPS VQEEFYQARKK 
Sbjct: 61   AQEMQDQVAEPLEKRMQELKWYDRSETYTRPGLAYTMLSLQDSTPPSQVQEEFYQARKKL 120

Query: 121  GDQAKLMPAGVIGPMLNDEFSDVTFAVYALKAKGEPQRQLVRDAETLRQQLLHVPGVKKV 180
            GD+AK +PAGVIGPM NDEFSDVTFA++ALKAKGEPQR LVRDAE+LRQ+LLHVPGVKKV
Sbjct: 121  GDEAKNLPAGVIGPMFNDEFSDVTFALFALKAKGEPQRLLVRDAESLRQRLLHVPGVKKV 180

Query: 181  NIIGEQAERIFVSFSHDRLATLGITPQDIFSALDNQNALSPSGSVETQGPQVVVRVDGAF 240
            NIIGEQAERIFVSFSHDRLATLG++PQDIFSAL++QN L+P+GS++T+GPQV +R+DGAF
Sbjct: 181  NIIGEQAERIFVSFSHDRLATLGVSPQDIFSALNSQNVLTPAGSIDTKGPQVFIRLDGAF 240

Query: 241  DQLAKIRETPVVAQGRPLKLSDVADVERGYEDPATFLVRNDGEPALLLGIVMREGWNGLD 300
            D+L KIRETP+V QGR L+LSDVA VERGYEDPATF  RN GE ALLLGIVMR+GWNGLD
Sbjct: 241  DKLEKIRETPIVVQGRTLQLSDVATVERGYEDPATFQNRNQGETALLLGIVMRDGWNGLD 300

Query: 301  LGKALEAETAKINEGMPLGMTLSKVTDQAVNITSSVDEFMIKFFVALLVVMLVCFLSMGW 360
            LGKAL+AETAKIN GMPLGMTL+KVTDQ+VNI+S+VDEFMIKFFVALLVVM+VCF+SMGW
Sbjct: 301  LGKALDAETAKINAGMPLGMTLTKVTDQSVNISSAVDEFMIKFFVALLVVMVVCFVSMGW 360

Query: 361  RVGVVVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEE 420
            RVGVVVAAAVPLTLAIVFVVM A+GKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEE
Sbjct: 361  RVGVVVAAAVPLTLAIVFVVMEASGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEE 420

Query: 421  GYDRIKASAYAWSHTAAPMLSGTLVTAIGFMPNGFAQSTAGEYTSNMFWIVGIALIASWV 480
            GYDRIKASAYAWSHTAAPML+GTLVTA+GFMPNGFAQSTAGEYTSNMFWIVGIALIASW+
Sbjct: 421  GYDRIKASAYAWSHTAAPMLAGTLVTAVGFMPNGFAQSTAGEYTSNMFWIVGIALIASWI 480

Query: 481  VAVAFTPYLGVKLLPRIKTIEGGHAAIYNTRHYNRFRALLGWVIAHKWLVAGTVVSTFVA 540
            VAV FTPYLGVK+LP IK +EGGHAAIYNTRHYNRFR LL WVIA KW+VAGTV++ F  
Sbjct: 481  VAVVFTPYLGVKMLPDIKKVEGGHAAIYNTRHYNRFRRLLAWVIARKWIVAGTVIAVFTV 540

Query: 541  AVLGMGLVKKQFFPTSDRPEVLVELQMPYGTSIEQTNATAIKVESWLRQQEEAKIVTTYI 600
            A+LGMGLVKKQFFPTSDRPEVLVE+QMPYGT+IEQTNATA K+E+WLR+Q+EAKIVT+YI
Sbjct: 541  AILGMGLVKKQFFPTSDRPEVLVEVQMPYGTAIEQTNATAAKIEAWLRKQKEAKIVTSYI 600

Query: 601  GQGPPRFFLAMAPELPDPSFAKIVVLTENQGAREALKHRLREAASEGLAPGAQVRVTQLV 660
            GQG PRFFLAMAPELPDPSFAKIVVLT+N  AREALK RLREA + GL P A+VRVTQLV
Sbjct: 601  GQGAPRFFLAMAPELPDPSFAKIVVLTDNPEAREALKFRLREAVAGGLTPEARVRVTQLV 660

Query: 661  FGPYSPYPVAYRVMGPDASQLRQIAARVQSVLQASPMMKTVNTDWGPLVPTLHFSLNQDR 720
            FGPYSPYPVAYRVMGPD + LR+IA +V+ V+QASPMM+TVNTDWGP VP LHF+LNQDR
Sbjct: 661  FGPYSPYPVAYRVMGPDPTTLREIADKVEKVMQASPMMRTVNTDWGPRVPALHFTLNQDR 720

Query: 721  LQSVGLTSASVSQQLQFLLTGVPITSVREDIRSVQVVGRAAGQIRLDPAQIENFTLVGSN 780
            LQ+VGLTS + +QQLQFLL+G+PITSVREDIRSVQV+GRAAG IRLDPA+I  FTLVG+ 
Sbjct: 721  LQAVGLTSNAAAQQLQFLLSGIPITSVREDIRSVQVMGRAAGDIRLDPAKIAGFTLVGAA 780

Query: 781  GQRVPVSQIGDVSIRMEDPILRRRDRTPTMTVRGDIAEGLQPPDVSTAIWKDLQPIVTQL 840
            GQR+P+SQIG++ ++ME+P++RRRDR PT+TVRGDIAE LQPPDVSTAI K LQP++  L
Sbjct: 781  GQRIPLSQIGEIEVQMEEPVMRRRDRIPTITVRGDIAENLQPPDVSTAITKALQPVIDTL 840

Query: 841  PAGYKIEMAGSIEESAKASQAIVPLLPIMIALTLLIIILQVRSISAMVMVFLTSPLGLIG 900
            P GY+IE AGSIEES KA++A+VPL PIMIA+TLLIIILQVRS++AMVMVFLT+PLGLIG
Sbjct: 841  PDGYRIEQAGSIEESGKATKAMVPLFPIMIAMTLLIIILQVRSMAAMVMVFLTAPLGLIG 900

Query: 901  VVPVLLLFGQPFGINALVGLIALSGILMRNTLILIGQIDHNQLEGLAPFDAVVEATVQRA 960
            VVP LLLF QPFGIN LVGLIALSGILMRNTLILIGQI HN+ EGLAPF AVVEATVQRA
Sbjct: 901  VVPTLLLFNQPFGINTLVGLIALSGILMRNTLILIGQIHHNEQEGLAPFHAVVEATVQRA 960

Query: 961  RPVLLTALAAILAFIPLTHSVFWGTLAYTLIGGTFVGTIMTLVFLPAMYSIWFKIRPNS- 1019
            RPVLLTA+AAILAFIPLTHSVFWGTLAYTLIGGTF GTI+TLVFLPAMY+IWFKIRP++ 
Sbjct: 961  RPVLLTAMAAILAFIPLTHSVFWGTLAYTLIGGTFGGTIITLVFLPAMYAIWFKIRPDTQ 1020

Query: 1020 RIAKPEAA 1027
            + A+P+AA
Sbjct: 1021 KPAEPQAA 1028