Pairwise Alignments

Query, 367 a.a., RND efflux membrane fusion protein from Pseudomonas putida KT2440

Subject, 314 a.a., Probable Co/Zn/Cd efflux system membrane fusion protein from Pseudomonas fluorescens FW300-N2E2

 Score =  427 bits (1099), Expect = e-124
 Identities = 224/299 (74%), Positives = 253/299 (84%)

Query: 55  VVARTQSDLGFRVSGKILQRLVDTGQTVKRGQPLMRMDPVDLNLQARAQQEAVTAARARA 114
           V AR QSDLGFRVSGK+L+RLVD GQ VK+GQPLMR+DP+DL LQARAQQEAVTAARARA
Sbjct: 1   VAARVQSDLGFRVSGKVLERLVDAGQAVKKGQPLMRLDPIDLGLQARAQQEAVTAARARA 60

Query: 115 KQTGDDEARYRGLVADGAVSASSYDQIKAAADAAKAQLSAAQAQADVARNATEYAVLLAD 174
           KQT DDEARYR LVA GA+SAS YDQIKAAAD AKAQLSAA+AQADVARNA+ YAVLLAD
Sbjct: 61  KQTADDEARYRELVAAGAISASGYDQIKAAADTAKAQLSAAEAQADVARNASGYAVLLAD 120

Query: 175 ADGVVMDTLAEPGQVVSAGQAVVRLARAGQREAVVYLPETLRPAPGSTALATLFGKPAQA 234
           ADGVVM+TLAEPGQVVS GQ VVRLARAGQREAVV LPETLRPA GS+A ATL+G  + A
Sbjct: 121 ADGVVMETLAEPGQVVSPGQPVVRLARAGQREAVVQLPETLRPAVGSSAQATLYGSTSGA 180

Query: 235 VPAKLRLLSDAADPITRTFEARYVLTGPLASAPLGATITLEIPDTDTDFEAKQIPIGALF 294
           V A+LRLLSD+AD +TRTFEARYVL G LA+APLG+T+TL I +        Q+PI AL+
Sbjct: 181 VTARLRLLSDSADRVTRTFEARYVLEGALANAPLGSTVTLRIAEGVAQGPVLQVPIAALY 240

Query: 295 DPGNGAGVWVIAGQPAKVSWRAVEVLSVSDEKAVVKSDLHAGDRIVALGAHLLRDGVEV 353
           DPGNG GVWVI G+PAKV+WR V+VL +SD+ A V   L+ G+RIVALGAHLLR+G  V
Sbjct: 241 DPGNGTGVWVIDGEPAKVTWRPVQVLGLSDDAARVAGRLNVGERIVALGAHLLREGEPV 299