Pairwise Alignments

Query, 367 a.a., RND efflux membrane fusion protein from Pseudomonas putida KT2440

Subject, 366 a.a., RND efflux membrane fusion protein from Pseudomonas fluorescens FW300-N2E2

 Score =  171 bits (432), Expect = 4e-47
 Identities = 123/343 (35%), Positives = 164/343 (47%), Gaps = 8/343 (2%)

Query: 13  LPLALVACGDSSPGKDPRDTPPVVKAVSVQDASALARSFSGVVVARTQSDLGFRVSGKIL 72
           L   L ACG   P   P    P +  V  Q +     S+ G V AR + DL FR+ GK+ 
Sbjct: 14  LAFLLSACGHDEPV--PVAVRPAM-VVKPQPSVQAMDSYPGEVRARFEPDLAFRIGGKVS 70

Query: 73  QRLVDTGQTVKRGQPLMRMDPVDLNLQARAQQEAVTAARARAKQTGDDEARYRGLVADGA 132
           +RLV+ GQ VK  QPL  +DP D+ LQ  A +  V AA A       +  RY+ L+    
Sbjct: 71  RRLVEEGQRVKANQPLAELDPEDVRLQLEAARAQVAAAEANLNLVRAERDRYKTLMERQM 130

Query: 133 VSASSYDQIKAAADAAKAQLSAAQAQADVARNATEYAVLLADADGVVMDTLAEPGQVVSA 192
           VS S YD  +    +  A+L   +A+ DVA N   Y++L A  DGVV     E GQVVSA
Sbjct: 131 VSRSQYDNAENLYRSGTARLKQIKAEFDVANNQASYSILRAPQDGVVARRSVEVGQVVSA 190

Query: 193 GQAVVRLARAGQREAVVYLPET--LRPAPGSTALATLFGKPAQAVPAKLRLLSDAADPIT 250
           GQ V  LA  G+RE ++ LPE    R   G      L+ +P Q    ++R LS AADP +
Sbjct: 191 GQTVFTLATDGEREVLISLPEQGFGRFKIGQPVSVELWSQPDQRFSGRIRELSPAADPKS 250

Query: 251 RTFEARYVLTGPLASAPLGATITLEIPDTDTDFEAKQIPIGALFDPGNGAGVWVIAGQPA 310
           RTF AR   T     A LG +  + I   D       +P+ AL        VWV+     
Sbjct: 251 RTFAARVAFTAGNVPAELGQSARVFIQTADK--VPLSVPLSALTAENGATYVWVVNANNT 308

Query: 311 KVSWRAVEVLSVSDEKAVVKSDLHAGDRIVALGAHLLRDGVEV 353
            +    V V +  ++   V   L   D +VA G H+L DG +V
Sbjct: 309 -LKKVPVRVGAFGEKTVPVLEGLGPDDWVVAAGVHVLLDGQQV 350