Pairwise Alignments

Query, 367 a.a., RND efflux membrane fusion protein from Pseudomonas putida KT2440

Subject, 413 a.a., RND family efflux transporter, MFP subunit from Pseudomonas stutzeri RCH2

 Score = 77.0 bits (188), Expect = 8e-19
 Identities = 81/313 (25%), Positives = 130/313 (41%), Gaps = 16/313 (5%)

Query: 53  GVVVARTQSDLGFRVSGKILQRLVDTGQTVKRGQPLMRMDPVDLNLQARAQQEAVTAARA 112
           G V      +L  RV G++++   + GQ VK+G  L  +DP    +  +  +  +   RA
Sbjct: 76  GSVTPLNTVNLRSRVGGELVELRFEEGQRVKKGDLLAVIDPRPYKVALQQAEGTLQQNRA 135

Query: 113 RAKQTGDDEARYRGLVADGAVSASSYDQIKAAADAAKAQLSAAQAQADVARNATEYAVLL 172
           + K    D  RYRGL AD +++  + D  +A     +  L+A QA  + AR   E+  + 
Sbjct: 136 QLKNAQVDFERYRGLFADDSIAKQTLDTQEALVSQYQGTLAANQASVNEARLNLEFTQIR 195

Query: 173 ADADGVVMDTLAEPGQVVSAGQA--VVRLARAGQREAVVYLPE------TLRPAPGSTAL 224
           +  DG V     + G +V+A     +V + +         LPE        R   G    
Sbjct: 196 SPIDGRVGLRQLDVGNLVAANDTTPLVVITQTQPMSISFTLPEGDLLPVLTRYRQGDKLA 255

Query: 225 ATLF--GKPAQAVPAKLRLLSDAADPITRT--FEARYVLTGPLASAPLGATITLEIPDTD 280
             ++  G+        L  + +  D  T T   +AR+     L        + L +   +
Sbjct: 256 VQIWDRGEKLMFGEGLLESIDNQIDATTGTLRLKARFDNEQELLIPNQFVNVRLRV---E 312

Query: 281 TDFEAKQIPIGALFDPGNGAGVWVIAGQPAKVSWRAVEVLSVSDEKAVVKSDLHAGDRIV 340
           T  +A  IP  AL     G   +V+ G+  KV  R ++    + E  VV   L  G+R+V
Sbjct: 313 TLSDAVLIPSAALQFGSRGTFAYVV-GEDNKVQLRLLKAGPSNGETTVVLEGLEVGERVV 371

Query: 341 ALGAHLLRDGVEV 353
             G   LRDG EV
Sbjct: 372 MEGTDRLRDGAEV 384