Pairwise Alignments

Query, 367 a.a., RND efflux membrane fusion protein from Pseudomonas putida KT2440

Subject, 361 a.a., membrane protein from Klebsiella michiganensis M5al

 Score = 90.9 bits (224), Expect = 5e-23
 Identities = 93/355 (26%), Positives = 149/355 (41%), Gaps = 42/355 (11%)

Query: 12  LLPLALV---ACGDSSPGKDPRDTPPVVKAVSVQDASALARSFSGVVVARTQS----DLG 64
           L+PL ++   AC   +P        P+ + V V +  A+  S   V  AR +S    DL 
Sbjct: 7   LIPLVILITTACDRKAP-----QITPLPRMVKVAEVVAIGDSQQRVFPARIESGDSTDLS 61

Query: 65  FRVSGKILQRLVDTGQTVKRGQPLMRMDPVDLNLQARAQQEAVTAARARAKQTGDDEARY 124
           F+  G+I    V  G  + +GQPL R+   +   +   +Q A T A+ +         R+
Sbjct: 62  FKRGGQIESLDVRQGAAITQGQPLARLSAREAQQRVNERQTAATLAQRQFD-------RF 114

Query: 125 RGLVADGAVSASSYDQIKAAADAAKAQLSAAQAQADVARNATEYAVLLADADGVVMDTLA 184
           + L    A+S       KA  D  +A   AA A   +AR       L A   GV      
Sbjct: 115 QTLAGRQAIS-------KAEMDIQRANRDAANAALKIAREELSQMTLTAPFSGVAAYVPV 167

Query: 185 EPGQVVSAGQAVVRLARAGQREAVVYLPETLRPA-----PGSTALATLFGKPAQAVPAKL 239
              QVV+AGQ +V L R    + V  +PE L  A          +  +   P +   A+ 
Sbjct: 168 RNHQVVAAGQPIVTLTRTDLLDVVFSVPENLFTALDIRNAQYRPVVKINAMPDRQFTAEY 227

Query: 240 RLLSDAADPITRTFEARYVLTGPL---ASAPLGATITLEIPD--TDTDFEAKQIPIGALF 294
           +  + ++D  T T++    +  P    A   +  T+T+ + +        A  +P+ A+F
Sbjct: 228 KEHTGSSDSSTLTWQIILTMPRPADFPAVGGVSGTVTINLANLPASAGKNAVVVPVEAVF 287

Query: 295 DPG----NGAGVWVI--AGQPAKVSWRAVEVLSVSDEKAVVKSDLHAGDRIVALG 343
           +P     N   VWV+  +G   K+  R V V  V+ +  V+   L  G+R+VA G
Sbjct: 288 NPDNRPRNDPHVWVVQGSGDQLKLEERQVGVGQVTSQGVVITEGLSVGERVVAAG 342