Pairwise Alignments

Query, 367 a.a., RND efflux membrane fusion protein from Pseudomonas putida KT2440

Subject, 382 a.a., RND family efflux transporter MFP subunit from Klebsiella michiganensis M5al

 Score =  144 bits (364), Expect = 3e-39
 Identities = 111/352 (31%), Positives = 171/352 (48%), Gaps = 12/352 (3%)

Query: 8   IVGCLLPLALVACGDSSPGKDPRDTPPVVKAVSVQDASALARSFSGVVVARTQSDLGFRV 67
           IV  L+ + LV CGD S G  P    PV   V    A+  +   +G + A  ++ L FR 
Sbjct: 32  IVLALMIVPLVGCGDKS-GDKPAPARPVRYVVIGSPATLPSLERTGEIHAHDETALSFRT 90

Query: 68  SGKILQRLVDTGQTVKRGQPLMRMDPVDLNLQARAQQEAVTAARARAKQTGDDEARYRGL 127
           +G+++ R VD G  V  GQ L  +D      Q  +      +ARA A+    + +R + L
Sbjct: 91  AGRMMTRAVDIGDRVNYGQLLATLDDTSAQNQLDSATADEESARATARVAALNVSRMQKL 150

Query: 128 VADGAVSASSYDQIKAAADAAKAQLSAAQAQADVARNATEYAVLLADADGVVMDTLAEPG 187
           +A GA++ S  D  +A    A A++ +++A    AR +  +  L +  +G++    A PG
Sbjct: 151 IATGAIARSQLDSARADWLVASARVKSSEAALRNARESLGWTRLTSPGEGIITAVSASPG 210

Query: 188 QVVSAGQAVVRLARAGQREAVVYLP-----ETLRPAPGSTALATLFGKPAQAVPAKLRLL 242
           QVV+AG+ VV LA    R+ V  +P     E  R      AL +  G  A A+   LR +
Sbjct: 211 QVVNAGETVVTLAAGQARDVVFDIPDPAKVEAQRAEEFQVALLSDAGVNAFAI---LRDI 267

Query: 243 SDAADPITRTFEARYVLTGPLASAPLGATITLEIPDTDTDFEAKQIPIGALFDPGNGAGV 302
           S  ADP TRT+  R  L  P A+  LG+++T+ +P + +   A  +P  AL   G    V
Sbjct: 268 SPQADPQTRTWRVRATLKKPPAAMALGSSVTVRLPSSGSAGYA--VPASALSRCGEKPAV 325

Query: 303 WVIAGQPAKVSWRAVEVLSVSDEKAVVKSDLHAGDRIVALGAHLLRDGVEVM 354
           +VI  Q  +   R V   S +    ++ S L  GDR++  G   LR G +V+
Sbjct: 326 FVITPQ-MQAQLRVVVPASYTASSVIIASGLMPGDRVITAGVSKLRPGEKVV 376