Pairwise Alignments

Query, 296 a.a., Universal stress protein family from Pseudomonas putida KT2440

Subject, 310 a.a., universal stress protein family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 76.6 bits (187), Expect = 6e-19
 Identities = 73/299 (24%), Positives = 131/299 (43%), Gaps = 8/299 (2%)

Query: 1   MTPYRRILLIMTEAQAN-AALSRAMALSAASGASLHV-LGIHESG--VLRLPHELQEAPL 56
           M  Y++IL+++     N  AL+RA+ L++ S A + V L I +    +  +    +   +
Sbjct: 1   MKDYQKILVVVDPTTENQVALARAVTLASKSNAHVTVFLSIFDFSYEMTSILSSQEREAM 60

Query: 57  HSASFMHFSTELKALLDEQSFVGARPGFEAVETSNPRDQLPACIARYAPDLVIKGCPGHS 116
                      ++ LL   + +G     + +  + P + +         DL++KG   H 
Sbjct: 61  RQGVIDQRVAWIQDLLAPYNHLGLNIDTQVIWHNRPFESIINHAIAGQYDLIVKGTHAHD 120

Query: 117 LLEQIARTSLDQALLHGSETPLLFVPADAPAIPQNILVAVDVANPSPHNDALNHALVAAG 176
            L+ +  T  D  L+  +  P+L V          IL AV+VA     +  LN  ++   
Sbjct: 121 KLKAVIFTPTDWHLMRKAPVPVLMVKDHDWPETGKILCAVNVATEDTDHQMLNGKIIEHA 180

Query: 177 QQLATQCKGQLHLLSAYD-LPIAMLAN-PDLAGPWVNQ-LRESLQLPFDALADAHGIAHT 233
           + LA +   ++HL++ +   P+ +    PD      N  +R   +     LADA+GI   
Sbjct: 181 KDLAGKFAAEVHLVNGFPGTPVNLAIELPDFDAQTYNDTIRLQHEQRVQYLADAYGIDKQ 240

Query: 234 HRHFSEGAPLRVIKSYIATLKIDAVVVGTV-QPRHWAKVIGDTTERLVSHAPCSILTIR 291
           + H  EG P  VI      L  + V++GTV +    A +IG+T E ++    C +L I+
Sbjct: 241 NCHVKEGLPEDVIPELAEQLDAELVILGTVGRTGFSAALIGNTAEHVIDSINCDLLAIK 299