Pairwise Alignments

Query, 308 a.a., Universal stress protein family from Pseudomonas putida KT2440

Subject, 310 a.a., universal stress protein family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 84/306 (27%), Positives = 136/306 (44%), Gaps = 16/306 (5%)

Query: 1   MGQYRQLLVLLTEVDPHSAALRRALALAQVSGASVHV-LGLFEPSEEH---LLREERLNE 56
           M  Y+++LV++     +  AL RA+ LA  S A V V L +F+ S E    L  +ER  E
Sbjct: 1   MKDYQKILVVVDPTTENQVALARAVTLASKSNAHVTVFLSIFDFSYEMTSILSSQER--E 58

Query: 57  ADIKRQYQHYRAQLTGLVERHRGSGTTLTVDSLNAEDIRSQAIDYISEQQPDMVIKDSEA 116
           A  +       A +  L+  +   G  +    +         I++    Q D+++K + A
Sbjct: 59  AMRQGVIDQRVAWIQDLLAPYNHLGLNIDTQVIWHNRPFESIINHAIAGQYDLIVKGTHA 118

Query: 117 ASALVRMFGTPLDCALMRGFKGVSHFVPAAAVSLPRRVLVAVDTAFSETPAVQACFNRGL 176
              L  +  TP D  LMR        V         ++L AV+ A  +T       N  +
Sbjct: 119 HDKLKAVIFTPTDWHLMRKAPVPVLMVKDHDWPETGKILCAVNVATEDTD--HQMLNGKI 176

Query: 177 IRAGQALALQCDAHLHLLSAY-----NLAGVFASDMNVSQAWIDEMREALQEPFEALADA 231
           I   + LA +  A +HL++ +     NLA +   D + +Q + D +R   ++  + LADA
Sbjct: 177 IEHAKDLAGKFAAEVHLVNGFPGTPVNLA-IELPDFD-AQTYNDTIRLQHEQRVQYLADA 234

Query: 232 EGVAPDRRHFMEGGPVQVIREQVASLDIDAVVMGVVQPKGLD-KLLGDTTERIVSRPPCS 290
            G+     H  EG P  VI E    LD + V++G V   G    L+G+T E ++    C 
Sbjct: 235 YGIDKQNCHVKEGLPEDVIPELAEQLDAELVILGTVGRTGFSAALIGNTAEHVIDSINCD 294

Query: 291 VLAVHP 296
           +LA+ P
Sbjct: 295 LLAIKP 300