Pairwise Alignments

Query, 307 a.a., DNA-binding transcriptional repressor PaaX(phenylacetyl-CoA) from Pseudomonas putida KT2440

Subject, 311 a.a., phenylacetic acid degradation operon negative regulatory protein PaaX from Klebsiella michiganensis M5al

 Score =  251 bits (640), Expect = 2e-71
 Identities = 131/309 (42%), Positives = 185/309 (59%), Gaps = 2/309 (0%)

Query: 1   MSNLAPLNHLITRFQEQTPIRASSLIITLYGDAIEPHGGTVWLGSLINLLEPIGINERLI 60
           M+ ++ L+  I +     PI  +SLI +LYGDA+   GG VWLGS+  LLE +G  ER +
Sbjct: 1   MNQMSKLDTFIQQAVTAMPISGTSLIASLYGDALLQRGGEVWLGSVAALLEGLGFGERFV 60

Query: 61  RTSIFRLTKEGWLTAEKVGRRSYYSLTGTGRRRFEKAFKRVYSPSQPAWDGAWTLVLLSQ 120
           RT++FRL KE WL   ++GRRS+Y L+  G R   +A  ++Y  S P WDG W L+L   
Sbjct: 61  RTALFRLNKEEWLDVVRIGRRSFYRLSDKGLRLTRRAEHKIYRASAPEWDGTWLLLLSEG 120

Query: 121 LEAGKRKAVREELEWQGFGVMAPNLLGCPRADRADLVATLHDLEAGDDSIVFETHTQEVL 180
           LE      V+++L WQGFG +AP+LL  P    AD+ + LH+    ++ I FE H+   L
Sbjct: 121 LEKSTLAEVKKQLLWQGFGALAPSLLASPSQKLADVQSLLHEAGVAENVICFEAHSPLAL 180

Query: 181 ASKAMRAQVRESWRIDELGQQYSEFIQLFRPLWQGLK--EQPLLDAQDCFLARTLLIHEY 238
           +  A+RA+V E W + +    Y  FI LFRPL   L+  E   L  +  F  + LLIH Y
Sbjct: 181 SRAALRARVEECWHLTDQNAMYETFITLFRPLLPLLRDCEPAELTPERSFQIQLLLIHFY 240

Query: 239 RRLLLRDPQLPDELLPGDWEGRAARQLCRNLYRLVFAKAEEWLNAALETADGPLPDVSES 298
           RR++L+DP LP+ELLP  W G+ ARQLC N+Y+ V   A  ++    E++ G LP     
Sbjct: 241 RRVVLKDPLLPEELLPAHWAGQTARQLCINIYQRVAPGALAFVGEKGESSVGELPAPGPL 300

Query: 299 FYKRFGGLA 307
           +++RFGGLA
Sbjct: 301 YFQRFGGLA 309