Pairwise Alignments

Query, 505 a.a., 3-hydroxyadipyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 720 a.a., Probable fatty oxidation protein FadB from Mycobacterium tuberculosis H37Rv

 Score =  152 bits (385), Expect = 3e-41
 Identities = 96/287 (33%), Positives = 154/287 (53%), Gaps = 8/287 (2%)

Query: 9   QVAVIGAGAMGAGIAQVAAQAGHPVKLYDNRPGAAAQAVTGIDRQLARLVDKGKLLAAER 68
           ++ V+GAG MGAGIA V+A+AG+ V L D    AAA+     ++  A+ +++G+      
Sbjct: 327 RIGVLGAGMMGAGIAYVSAKAGYEVVLKDVSLEAAAKGKGYSEKLEAKALERGRTTQERS 386

Query: 69  ETINARLCPVDTLEALADAGLVIEAIVENLQVKQALFSQLETLCAADCILASNTSSLSIT 128
           + + AR+ P            VIEA+ EN ++K  +F ++E +   + IL SNTS+L IT
Sbjct: 387 DALLARITPTADAADFKGVDFVIEAVFENQELKHKVFGEIEDIVEPNAILGSNTSTLPIT 446

Query: 129 SLAAGLERPQHVVGMHFFNPAPLMALVEVVSGLATDPAVAACIYATAQAWGKQPVHARST 188
            LA G++R +  +G+HFF+P   M LVE++ G  T     A ++    A GK P+    +
Sbjct: 447 GLATGVKRQEDFIGIHFFSPVDKMPLVEIIKGEKTSDEALARVFDYTLAIGKTPIVVNDS 506

Query: 189 PGFIVNRVARPFYAESLRLLQEGAADCASLDALMRDSGGFRMGAFELTDLIG----HDVN 244
            GF  +RV   F  E+L +L EG  + AS++       G+     +L+D +     H + 
Sbjct: 507 RGFFTSRVIGTFVNEALAMLGEG-VEPASIEQ-AGSQAGYPAPPLQLSDELNLELMHKIA 564

Query: 245 YAVTCSVFDAFYGDFRFQPS-LVQKELVDAGHLGRKTGQGFYRYAEG 290
            A    V DA  G ++  P+  V +++++ G  GR  G GFY YA+G
Sbjct: 565 VATRKGVEDA-GGTYQPHPAEAVVEKMIELGRSGRLKGAGFYEYADG 610



 Score = 26.9 bits (58), Expect = 0.002
 Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 4/102 (3%)

Query: 390 TSDSARDQAVALLQRAGLKVTGVADLPGLVVLRTVAMLANEAADAVLQGVGSAADIDLAM 449
           TSD A  +        G     V D  G    R +    NEA   + +GV  A+      
Sbjct: 481 TSDEALARVFDYTLAIGKTPIVVNDSRGFFTSRVIGTFVNEALAMLGEGVEPASIEQAGS 540

Query: 450 RAGVNYPCGPLAWA--ANIGIAHTLRVLDNLQCSYGESRYRP 489
           +AG  YP  PL  +   N+ + H + V            Y+P
Sbjct: 541 QAG--YPAPPLQLSDELNLELMHKIAVATRKGVEDAGGTYQP 580