Pairwise Alignments

Query, 406 a.a., 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase from Pseudomonas putida KT2440

Subject, 387 a.a., 3-ketoacyl-CoA thiolase (RefSeq) from Shewanella loihica PV-4

 Score =  305 bits (780), Expect = 2e-87
 Identities = 182/400 (45%), Positives = 237/400 (59%), Gaps = 20/400 (5%)

Query: 9   ALIIDAVRTPIGRY-AGALSSVRADDLAAIPLKALIQRHPELDWKAIDDVIFGCANQAGE 67
           A+I+D +RTP+GR  AG   ++RA+ L+A  +KAL+ R+P+LD   I+DVI+GC  Q  E
Sbjct: 4   AVIVDCIRTPMGRSKAGVFRNMRAESLSAELMKALLVRNPQLDPNTIEDVIWGCVQQTLE 63

Query: 68  DNRNVAHMASLLAGLPLEVPGTTINRLCGSGLDAIGNAARALRCGEAGLMLAGGVESMSR 127
              N+A  A+LLAG+P +    T+NRLCGS ++AI  AARA+  G     + GGVE M  
Sbjct: 64  QGFNIARNAALLAGIPKQAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIVGGVEHMGH 123

Query: 128 APFVMGKSEQAFGRAAELFDTTIGWRFVNPLMKAAYGIDSMPETAENVAEQFGISRADQD 187
            P   G      G A  +                A     M  TAE + +  GI+R  QD
Sbjct: 124 VPMNHGVDFHP-GLATNV----------------AKASGMMGLTAEMLGKMHGITRQQQD 166

Query: 188 AFALRSQHKAAAAQARGRLAREIVPVEIPQRKGPAKVVEHDEHPRGDTTLEQLARLGTPF 247
            FA+RS  +A AA   GR A EI  +E     G    V HDE  R +T+LE LA L   F
Sbjct: 167 EFAVRSHQRAHAATVEGRFANEIHAIEGHDANGALIKVMHDEVIRPETSLESLATLRPVF 226

Query: 248 REG-GSVTAGNASGVNDGACALLLASSAAARRHGLKARGRIVGMAVAGVEPRLMGIGPVP 306
               G+VTAG +S ++DGA A+L+     A+  GL  R RI  MAVAG +  +MG GPVP
Sbjct: 227 DPANGTVTAGTSSALSDGASAMLVMEEEKAKALGLPIRARIRSMAVAGCDAAIMGYGPVP 286

Query: 307 ATRKVLALTGLALADLDVIELNEAFAAQGLAVLRELGLAD-DDPRVNRNGGAIALGHPLG 365
           AT+K L   GL + D+D+IELNEAFAAQ L  +++LGL D  D +VN NGGAIALGHPLG
Sbjct: 287 ATQKALQRAGLTMNDIDLIELNEAFAAQSLPCVKDLGLMDLVDEKVNLNGGAIALGHPLG 346

Query: 366 MSGARLVTTALHELEETAGRYALCTMCIGVGQGIAMIIER 405
            SGAR+ TT ++ +E       L TMCIG+GQGIA + ER
Sbjct: 347 CSGARISTTLINLMESKDATLGLATMCIGLGQGIATVFER 386