Pairwise Alignments

Query, 520 a.a., acetate permease from Pseudomonas putida KT2440

Subject, 533 a.a., sodium:solute symporter family protein from Methanococcus maripaludis S2

 Score =  103 bits (258), Expect = 1e-26
 Identities = 113/524 (21%), Positives = 215/524 (41%), Gaps = 52/524 (9%)

Query: 6   ISMFMVFVCFTLLVTRWAALR----TRSASDFYTAGGGLTGMQNGLAIAGDMISAASFLG 61
           I +  V V   LLV  +   +    T SA D+   G  +      ++     IS A+ +G
Sbjct: 3   ILLLNVIVLIYLLVIGYLGYKGWKGTSSAEDYMVGGRKIHPFVMAMSYGATFISTAAIVG 62

Query: 62  ISAMMFMNGYDGL-LYALGVLAGWPIILFLIAERLR----NLGKYTFADVVSYRLAQTPV 116
                 + G   L L  L +  G  I      +R R    NL   TF ++++ R     +
Sbjct: 63  FGGFSGLFGMSLLWLTFLNIFLGIFIAFVFFGKRTRKMGHNLNALTFPELLAKRFESKFI 122

Query: 117 RLTSAFGTLVVALMYLVAQMVGAGKLIELLFGISYLYAVMLVGVLMVSYVTFGGMLATTW 176
           +  S         +Y  A ++GA + IE    IS+  A+++  +++  YV  GG+    +
Sbjct: 123 QWFSGLLIFCAMPIYAAAVLIGAARFIETTLNISFDVALLVFSIIIAVYVVMGGLKGVMY 182

Query: 177 VQIIKAVMLLSGTSFMAFMVLKHFGFSTEA--MFASAVAVHAKGQAIMAPGGLLSNP--- 231
               +  ++  G  F+ +M     G  T A    ++   +     A +   G  S P   
Sbjct: 183 TDAFQGTIMFFGMLFLLYMTYDILGGVTTAHQAISNMSGLVPANLASVGHAGWTSMPTFG 242

Query: 232 -------VDAISLGLGMMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFI----GYFYL 280
                  V +I LG+G+  G    P +++RF TV   +E  ++V     FI    G  Y+
Sbjct: 243 SPMWWTIVSSIILGVGI--GVLAQPQLIVRFMTVKSNRELNRAVLIGAVFILIATGTAYV 300

Query: 281 L-----LIVVGFGAIVMVGTEPSYRDATGAIIGGGNMVAVHLAQAVGGNLFLGFISAVAF 335
           +     +  +    ++ +G   S    TG      +++ +++ +A+       F+ ++  
Sbjct: 301 VGTLSNVYFMNTEGVLSIGATVSEAFPTG---NSDSIMPLYINKAMPEWFIYIFLVSLLA 357

Query: 336 ATILAVVAGLALSGASAVSHDLYACVMRKGKATEQEEMRVSRIATLLIGLLAVILGLMFE 395
           A +  + +     G S +  D+Y  +  K        + ++R+  ++  ++A ILG +  
Sbjct: 358 AAMSTISSQFHAQGTS-IGRDVYETICGK---KGLNSVIITRLGIIVAIVIAAILGYILP 413

Query: 396 SQNIAFLSGLVLAVAASVNFPVLLLSMFWKGLTTRGAVCGSMAG-LVSAVLLVVLGPA-- 452
              +A  + L   + ++   P   L +FWK  T  GA+ G + G  VS   LV +  A  
Sbjct: 414 GGIVARGTALFFGLCSAAFLPAYALGLFWKRTTKEGAIAGLLTGTFVSLFCLVFIHQAES 473

Query: 453 ---------VWVNVLHNETALFPYSNPALFSMSLAFLSAWVFSV 487
                    +  +VL +    +PY +P + S+ LAF++  + S+
Sbjct: 474 AALGISKMLIGRDVLISAMP-WPYVDPMVISLPLAFIATVIVSL 516