Pairwise Alignments

Query, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

Subject, 420 a.a., tricarboxylate porin (from data) from Pseudomonas stutzeri RCH2

 Score =  357 bits (917), Expect = e-103
 Identities = 190/407 (46%), Positives = 252/407 (61%), Gaps = 12/407 (2%)

Query: 19  LATVALPMPALADFIGDSHARLELRNHYINRDFRQSNAPQAKAEEWGQGFTAKLESGFTE 78
           +A  +L   A A FI DS A L+ +N Y+NRDFR+ +  Q+K EEW QGF   ++SGFTE
Sbjct: 18  VAAASLAPLAQAAFIEDSSATLQTQNIYLNRDFREGSG-QSKREEWTQGFILDVQSGFTE 76

Query: 79  GPVGFGVDALGQLGIKLDSSRDRRNTGLLPFGPNSHEPVDDYSELGLTGKVRVSKSTLRL 138
           G VG G+DALG LGIKLDS   R  T LLP   +   P D++S LGLT K +++++ LR 
Sbjct: 77  GTVGVGLDALGMLGIKLDSGGGRTGTDLLPVHDDGSTP-DEFSRLGLTAKAKIAETELRY 135

Query: 139 GTLQPILPVVVYNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKANLRDSSGRDDIGY-- 196
           G+  P +PVV  +D+R L   F+GG  TS+D++GLT   GRL K   R S+   D+    
Sbjct: 136 GSHIPEMPVVKASDSRTLPQVFEGGTATSKDIEGLTLIGGRLDKVIDRASTNSQDLQLNN 195

Query: 197 ------GAASSDHLDFGGGSYAITPQTTVSYYYAKLQDIYRQQFVGLIDTRPLAEGVSLR 250
                 GAA +DHL F G  YA     T  YYY +L D+YRQ F GL+  +PL +  +L 
Sbjct: 196 KNSRFAGAAEADHLTFAGAEYAFNKNLTGRYYYGELDDVYRQHFFGLLAVKPLTDNSALS 255

Query: 251 SDLRYFDSRNDGAERAGNIDNRNFNAMFTLGVRAHKFTATWQQMSGDSAFPFVNGGDPFT 310
           +DLR   S + GA  AG IDN+ +N M    +  HK +  +QQM GD+ + +++G DPF 
Sbjct: 256 ADLRVMFSDDTGAANAGKIDNQAWNGMLGYSLGGHKVSLGYQQMRGDTGYAYIDGSDPFL 315

Query: 311 VNLVTYNTFTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYTDGRHAETATVTNGRERERDT 370
           VN V  N F  A   SWQ RYDY+F AMGIPGL+F+TRY  G +AE    +NG E ERD 
Sbjct: 316 VNFVQINDFANADERSWQARYDYNFAAMGIPGLTFLTRYVSGDNAEYNGGSNGSEWERDI 375

Query: 371 DITYVIQSGPFKDVSLRWRNVTFRSGNGLTNAVDENRLIIGYTLALW 417
           ++ YV+QSGP K+V++R RN  FRS        DENRLI+ Y+L +W
Sbjct: 376 ELKYVVQSGPLKNVAVRMRNAMFRS--DFARDADENRLIVSYSLPIW 420