Pairwise Alignments

Query, 273 a.a., non-homologous end joining protein from Pseudomonas putida KT2440

Subject, 293 a.a., Ku protein, prokaryotic from Pseudomonas stutzeri RCH2

 Score =  337 bits (863), Expect = 2e-97
 Identities = 170/273 (62%), Positives = 207/273 (75%), Gaps = 2/273 (0%)

Query: 1   MARAIWKGAISFGLVHIPVALNTAVRTERVDFDWLDKRSMEPVGYKRVNKVTGKEIDKDN 60
           M R IWKGA+SFGLVHIPVAL  A   + +DFDWLDKRSM+ VGYKR+NK TG++ID +N
Sbjct: 1   MPRTIWKGAVSFGLVHIPVALVPATTRQGIDFDWLDKRSMDRVGYKRINKTTGEDIDSEN 60

Query: 61  IVKGVEFEKGRYVVISEEEIRKARPETTQTIDIFSFVEAGDIPLQHFDTPYYLTPDRRGG 120
           IVKGVE+EKG YVVIS++EI+ A P+ TQT+DI +FV+A DI   + DTPYYLTPDRRG 
Sbjct: 61  IVKGVEYEKGSYVVISDDEIKSAHPKATQTVDIVAFVDAKDISFLYIDTPYYLTPDRRGE 120

Query: 121 KVYALLRETLEKTGKVALATVVLHTRQHLALLRPLDHALVMITLRWPEEVRGLETLELDA 180
           KVYALLRETL +TGKV +A VVL  +QHLA++ PL  ALVM TLRW +EVRG+E LEL  
Sbjct: 121 KVYALLRETLIQTGKVGIANVVLRNKQHLAVVMPLGKALVMNTLRWADEVRGVEYLELKD 180

Query: 181 SVTDSKVEKRELEMAKRLVEDMSGPWKPEDYHDAFRQTIMDLVEEKASKGKIEAVEKGDT 240
              D  + +REL+MAKRLVEDM+  WKPE Y D F+  IM+LVE+KA +GK+EAV   + 
Sbjct: 181 EALDPDLAERELDMAKRLVEDMTEKWKPEQYKDTFQDQIMELVEKKAREGKLEAVGGPEE 240

Query: 241 GAAEKGADILDLTELLKRSLGGKKPVKKTRKAS 273
               + AD++DLTELLKRSL  K    K R AS
Sbjct: 241 AVDRRSADVIDLTELLKRSLAAKP--GKARAAS 271