Pairwise Alignments

Query, 296 a.a., Universal stress protein family from Pseudomonas putida KT2440

Subject, 310 a.a., universal stress protein family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  114 bits (285), Expect = 3e-30
 Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 18/306 (5%)

Query: 1   MSHYQRLLLIMRPMLHQAVALEQAGALARSASASLHIVALLEALDKLWLLESGKHQTERE 60
           M  YQ++L+++ P     VAL +A  LA  ++A  H+   L   D  + + S     ERE
Sbjct: 1   MKDYQKILVVVDPTTENQVALARAVTLASKSNA--HVTVFLSIFDFSYEMTSILSSQERE 58

Query: 61  AYRHTQQQQLETQANALRAS----GVQVTTEVAWSNDLQDDILEHVMEMRPDLLLKQVEH 116
           A R     Q       L A     G+ + T+V W N   + I+ H +  + DL++K    
Sbjct: 59  AMRQGVIDQRVAWIQDLLAPYNHLGLNIDTQVIWHNRPFESIINHAIAGQYDLIVKGTHA 118

Query: 117 EPALKRAFFTPLDWKLLRHCPVPVYLLGANRPTLPRQVVAAVDVADTSEEGQARNDSIVQ 176
              LK   FTP DW L+R  PVPV ++  +      +++ AV+VA    + Q  N  I++
Sbjct: 119 HDKLKAVIFTPTDWHLMRKAPVPVLMVKDHDWPETGKILCAVNVATEDTDHQMLNGKIIE 178

Query: 177 QASALALQTGAQLDLLHACDLSMAYMGDMGYAAWAIGDI-----AEPMRQALEDDFRKLA 231
            A  LA +  A++ L++       + G     A  + D       + +R   E   + LA
Sbjct: 179 HAKDLAGKFAAEVHLVN------GFPGTPVNLAIELPDFDAQTYNDTIRLQHEQRVQYLA 232

Query: 232 ERFGAPPERCHFVLGRPVPVLSEYVESQPVDALVMGRPIARGLD-RLFGSTTEHVLYQVP 290
           + +G   + CH   G P  V+ E  E    + +++G     G    L G+T EHV+  + 
Sbjct: 233 DAYGIDKQNCHVKEGLPEDVIPELAEQLDAELVILGTVGRTGFSAALIGNTAEHVIDSIN 292

Query: 291 CNILVV 296
           C++L +
Sbjct: 293 CDLLAI 298