Pairwise Alignments

Query, 321 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

Subject, 315 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components from Pseudomonas fluorescens FW300-N1B4

 Score =  190 bits (482), Expect = 4e-53
 Identities = 111/301 (36%), Positives = 163/301 (54%), Gaps = 3/301 (0%)

Query: 10  VAVALLLAGHASASERLTLRIGDQKG-NMRAQLEAADALRDLPYDIRWAEFPAAAPLAEA 68
           +A AL  A  +  +E + L +GDQ   N+RA +EA+  L+  PY + W  F AAAPLAEA
Sbjct: 11  LACALFAAPLSYGAEPVVLHVGDQNYYNIRASVEASGVLQGAPYTVDWKHFQAAAPLAEA 70

Query: 69  LNAGAIDAGIIGDAPLLFVLASGAPVKAIAVDKSDPYGTALLVRPEAPLRSAAELKGKRI 128
           LN GA+D G +GD+  LF+ A  APVK I V + +P   ALLV  ++P+++ A+LKGK++
Sbjct: 71  LNTGALDLGFLGDSGFLFLAAKQAPVKLIGVSRQNPDTIALLVPKDSPVKTIADLKGKKV 130

Query: 129 ATGRGSIGHHLALKALAQAGLTEKDVEFRFLGPVDAKIALANGSVDAWSTWEPYTALAEL 188
           A   G+    L L+AL QA L +  V+F  L P+DA  AL  GS+DA+  WEPY +   L
Sbjct: 131 AYWPGAWSQQLTLRALEQADLPDNYVDFIKLMPIDAAAALPQGSIDAFPVWEPYISQQIL 190

Query: 189 SGQGRVLVNGRGLSTGNSFLAATDKALEEPGRRAALQDYLNRLAAAQVWANQHLDTYSKT 248
               R ++  + L  G S +AA+  ++    +R A+ D+L RL  A+ W + H D Y+  
Sbjct: 191 FSGARPILTAKNLMPGLSAIAASTPSIN--SKREAIADFLVRLKKARAWVDTHTDEYADL 248

Query: 249 LAAIIGFPVEAARLQFERRQLRWQVIDTQTVTEQQDTADFYHTHGLMTERLDVAPTFATG 308
            A         +R    +  +    +D Q   + Q TADF      +   L  AP   + 
Sbjct: 249 WAKKANLDQNVSRHWLRQAHMTVGPVDQQAAADLQSTADFLFKVKALPAALATAPIIDSS 308

Query: 309 F 309
           F
Sbjct: 309 F 309