Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 334 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  179 bits (453), Expect = 1e-49
 Identities = 115/339 (33%), Positives = 168/339 (49%), Gaps = 33/339 (9%)

Query: 1   MRRYLIGRVGQALLVLWGAYTITYFILYLLPGDTLAIMLSASGMEADGLSPEDLAKARTY 60
           M R+L+GR+   +    G   I +  + LLPGD +A++   SG     +SPE  A+    
Sbjct: 1   MFRFLLGRLAVLIPTFIGVSIIAFSFIRLLPGDPVALL---SGERV--MSPERHAEISHQ 55

Query: 61  YGLDKGLFEQYFDLLWRALHGDLGQSLSLGRPVTALLAERLPQTLALAGAAIALSLLAGV 120
            G D+ +  QY D LW  L GD G S+   +PV     E  P T+ L+  AI  +++ G+
Sbjct: 56  LGFDRPIVMQYLDYLWGVLQGDFGTSIVTKKPVIDQFMELFPATVELSLCAIIFAVVVGI 115

Query: 121 GLACLTAYLQWRPLKTALARLPSLGFSVPVFWMGLLLIQVFAFALGWFPATGSQGLA--- 177
               + A  +       +     +GFS+P+FW GLLLI V +  L W P +G   L    
Sbjct: 116 PAGVVAAVKRGSIFDQIIMGTALIGFSMPIFWWGLLLIIVVSGILQWTPVSGRISLMFFF 175

Query: 178 -------------------------SLVLPAITLAIPSAAVYAQVLQRGFQGVWQEPYIT 212
                                     L+LP I L     AV A+  +     V  E Y+ 
Sbjct: 176 PSVTGFMLVDSLLSGQEGAFQSAFNHLILPTIVLGTIPLAVIARQTRSAMLEVLSEDYVR 235

Query: 213 TAFAKGLSRAQVQARHGLRNAALPLLTLVGLQVGNTVSGAVLVETIFSRNGVGRLAQEAV 272
           TA AKGLS  +V   H LRNA +P++T +GLQ+G  ++GA+L ETIFS  G+G+   ++V
Sbjct: 236 TARAKGLSTFRVVGIHALRNAMIPVVTTIGLQIGVMLAGAILTETIFSWPGIGKWMVDSV 295

Query: 273 LRQDIPVVLAIVGASAAAFVVVNLLVDLFYPYLDPRITH 311
            R+D  V+   +   AA  ++VNL VDL Y  ++PRI H
Sbjct: 296 FRRDYAVIQGGLLIIAAVIMLVNLAVDLLYGLINPRIRH 334