Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 336 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  178 bits (452), Expect = 1e-49
 Identities = 109/339 (32%), Positives = 172/339 (50%), Gaps = 33/339 (9%)

Query: 1   MRRYLIGRVGQALLVLWGAYTITYFILYLLPGDTLAIMLSASGMEADGLSPEDLAKARTY 60
           M  +++ RV   +    G   + + +++L+PGD + +M    G+     SP   A   T 
Sbjct: 1   MISFILRRVVLIIPAFIGVTLLAFALIHLIPGDPILVMAGERGV-----SPARHAMLMTQ 55

Query: 61  YGLDKGLFEQYFDLLWRALHGDLGQSLSLGRPVTALLAERLPQTLALAGAAIALSLLAGV 120
            GLD+ L+EQY   L +AL GDLG S+   +PV        P T+ L   A+  ++L G+
Sbjct: 56  LGLDRPLWEQYLTYLGKALQGDLGNSIVTRQPVIEEFKTLFPATIELGVFAMVFAVLIGI 115

Query: 121 GLACLTAYLQWRPLKTALARLPSLGFSVPVFWMGLLLIQVFAFALGWFPATGS------- 173
               L A  +   L   +  +   G+S+P+FW GLLLI + +  LGW P +G        
Sbjct: 116 PAGMLAAVKRGTSLDHGVMVVSLTGYSMPIFWWGLLLIMLVSGILGWTPVSGRIDSIMWI 175

Query: 174 ---------------------QGLASLVLPAITLAIPSAAVYAQVLQRGFQGVWQEPYIT 212
                                  +  L+LPAI +     AV A++ +     V +E Y+ 
Sbjct: 176 DTVTGFMLIDSLLSDEPGAFLSAVHHLILPAIVVGTIPLAVIARMTRSAMLEVLREDYVR 235

Query: 213 TAFAKGLSRAQVQARHGLRNAALPLLTLVGLQVGNTVSGAVLVETIFSRNGVGRLAQEAV 272
           TA AKG+S  +V   H LRNA +P++T++GLQ G  ++GA+L ETIF+  GVG+   +++
Sbjct: 236 TARAKGVSPGRVVMVHALRNALIPVITVIGLQTGVLLAGAILTETIFAWPGVGKWLVDSI 295

Query: 273 LRQDIPVVLAIVGASAAAFVVVNLLVDLFYPYLDPRITH 311
            R+D P V   +   +   ++VNLLVD+ Y  ++PRI H
Sbjct: 296 NRRDYPAVQGGILLISTVVILVNLLVDVLYGVINPRIRH 334