Pairwise Alignments

Query, 316 a.a., ABC transporter, permease protein from Pseudomonas putida KT2440

Subject, 314 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  185 bits (469), Expect = 1e-51
 Identities = 112/314 (35%), Positives = 171/314 (54%), Gaps = 3/314 (0%)

Query: 1   MRRYLIGRVGQALLVLWGAYTITYFILYLLPGDTLAIMLSASGMEADGLSPEDLAKARTY 60
           M  +++ R+   + +L GA  + + +L L P D     L  S +     + + LA+ R  
Sbjct: 1   MVSFVLKRLALLVPMLLGASLVIFLMLRLGPSDPAMDYLRLSRIPP---TVQALAETRQR 57

Query: 61  YGLDKGLFEQYFDLLWRALHGDLGQSLSLGRPVTALLAERLPQTLALAGAAIALSLLAGV 120
            GLD+ L  QY+  L +ALH D G S + GRPV   L   LP TL LAG A+AL+L   +
Sbjct: 58  LGLDQPLAVQYWVWLNKALHLDFGVSYATGRPVLPDLLHYLPATLHLAGVALALTLGLSI 117

Query: 121 GLACLTAYLQWRPLKTALARLPSLGFSVPVFWMGLLLIQVFAFALGWFPATGSQGLASLV 180
            L    A  +       +  +  LG S+P FW+G LL+ VF+  LGW PA G  G   ++
Sbjct: 118 PLGMWAARRRDALPDQIVRGVAFLGVSMPNFWLGFLLVLVFSVELGWLPAMGRGGAEHMI 177

Query: 181 LPAITLAIPSAAVYAQVLQRGFQGVWQEPYITTAFAKGLSRAQVQARHGLRNAALPLLTL 240
           +PA+ +A  S ++ A++L+     V  + ++  A  +GLS A+V+  H LRNA LP++T 
Sbjct: 178 MPAVAIAFMSLSINARLLRASMLEVSGQRHVYYARLRGLSAAKVERAHILRNALLPIITA 237

Query: 241 VGLQVGNTVSGAVLVETIFSRNGVGRLAQEAVLRQDIPVVLAIVGASAAAFVVVNLLVDL 300
            G+ VG  + G +++E+IF   GVGR A  A+  +D PV+          FV+ NL+VD+
Sbjct: 238 TGMHVGELIGGTLVIESIFGWPGVGRFAVSAIFNRDYPVIQCFTLLMVLIFVLCNLIVDI 297

Query: 301 FYPYLDPRITHTAK 314
            Y + DPRI   A+
Sbjct: 298 VYAWADPRIRLAAE 311